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Protein
Submitted name:

Microtubule-associated proteins 1A/1B light chain 3B

Gene

MAP1LC3B

Organism
Taeniopygia guttata (Zebra finch) (Poephila guttata)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Keywordsi

Biological processAutophagyUniRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-TGU-1632852 Macroautophagy
R-TGU-5205685 Pink/Parkin Mediated Mitophagy
R-TGU-8934903 Receptor Mediated Mitophagy

Names & Taxonomyi

Protein namesi
Submitted name:
Microtubule-associated proteins 1A/1B light chain 3BImported
Submitted name:
Putative microtubule-associated protein 1 light chain 3 beta variant 1Imported
Gene namesi
Name:MAP1LC3BImported
OrganismiTaeniopygia guttata (Zebra finch) (Poephila guttata)Imported
Taxonomic identifieri59729 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesPasseroideaEstrildidaeEstrildinaeTaeniopygia
Proteomesi
  • UP000007754 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi120Phosphatidylethanolamine amidated glycineUniRule annotation1

Keywords - PTMi

LipoproteinUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi59729.ENSTGUP00000007828

Family & Domainsi

Sequence similaritiesi

Belongs to the ATG8 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1654 Eukaryota
ENOG4111JAT LUCA
GeneTreeiENSGT00390000012937
HOGENOMiHOG000232034
HOVERGENiHBG051706
KOiK10435
OMAiIRDQHPT
OrthoDBiEOG091G18ST
TreeFamiTF312964

Family and domain databases

CDDicd01611 GABARAP, 1 hit
InterProiView protein in InterPro
IPR004241 Atg8-like
IPR029071 Ubiquitin-like_domsf
PANTHERiPTHR10969 PTHR10969, 1 hit
PfamiView protein in Pfam
PF02991 Atg8, 1 hit
SUPFAMiSSF54236 SSF54236, 1 hit

Sequencei

Sequence statusi: Complete.

B5G485-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSEKSFKQR RTFEQRVEDV RLIRDQHPTK IPVIIERYKG EKQLPVLDKT
60 70 80 90 100
KFLVPDHVNM SELIKIIRRR LQLNSNQAFF LLVNGHSMVS VSTPISEVYE
110 120
SEKDEDGFLY MVYASQETFG APASA
Length:125
Mass (Da):14,515
Last modified:October 14, 2008 - v1
Checksum:iC11758FD2CA1B996
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABQF01035215 Genomic DNA No translation available.
DQ217070 mRNA Translation: ACH46096.1
RefSeqiNP_001232222.1, NM_001245293.1
XP_012425945.1, XM_012570491.1
UniGeneiTgu.309

Genome annotation databases

EnsembliENSTGUT00000007913; ENSTGUP00000007828; ENSTGUG00000007601
GeneIDi100190519
KEGGitgu:100190519

Entry informationi

Entry nameiB5G485_TAEGU
AccessioniPrimary (citable) accession number: B5G485
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: June 20, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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