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Protein
Submitted name:

Putative RAB5C member RAS oncogene family variant 3

Gene

RAB5C

Organism
Taeniopygia guttata (Zebra finch) (Poephila guttata)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-TGU-432722 Golgi Associated Vesicle Biogenesis
R-TGU-6798695 Neutrophil degranulation
R-TGU-8854214 TBC/RABGAPs
R-TGU-8856828 Clathrin-mediated endocytosis
R-TGU-8876198 RAB GEFs exchange GTP for GDP on RABs

Names & Taxonomyi

Protein namesi
Submitted name:
Putative RAB5C member RAS oncogene family variant 3Imported
Gene namesi
Name:RAB5CImported
OrganismiTaeniopygia guttata (Zebra finch) (Poephila guttata)Imported
Taxonomic identifieri59729 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesPasseroideaEstrildidaeEstrildinaeTaeniopygia
Proteomesi
  • UP000007754 Componenti: Chromosome 27

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi59729.ENSTGUP00000002630

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0092 Eukaryota
ENOG410YCCP LUCA
GeneTreeiENSGT00760000119101
HOGENOMiHOG000233968
HOVERGENiHBG009351
KOiK07889
OMAiLIKAKHW
OrthoDBiEOG091G0HKN
TreeFamiTF300199

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit

Sequencei

Sequence statusi: Complete.

B5G1H7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAGRGGAARP NGPAAGNKIC QFKLVLLGES AVGKSSLVLR FVKGQFHEYQ
60 70 80 90 100
ESTIGAAFLT QTVCLDDTTV KFEIWDTAGQ ERYHSLAPMY YRGAQAAIVV
110 120 130 140 150
YDITNTDTFV RAKNWVKELQ RQASPNIVIA LAGNKADLAN KRAVDFQDAQ
160 170 180 190 200
TYADDNSLLF METSAKTAMN VNEIFMAIAK KLPKNEPQNA PGGPGRNRVV
210
DLQESSQPSR SQCCSN
Length:216
Mass (Da):23,567
Last modified:October 14, 2008 - v1
Checksum:iC44C64EE2DA114DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABQF01052784 Genomic DNA No translation available.
DQ215564 mRNA Translation: ACH45138.1
RefSeqiNP_001232748.1, NM_001245819.2
UniGeneiTgu.7872

Genome annotation databases

EnsembliENSTGUT00000002658; ENSTGUP00000002630; ENSTGUG00000002554
GeneIDi100190713
KEGGitgu:100190713

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABQF01052784 Genomic DNA No translation available.
DQ215564 mRNA Translation: ACH45138.1
RefSeqiNP_001232748.1, NM_001245819.2
UniGeneiTgu.7872

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi59729.ENSTGUP00000002630

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSTGUT00000002658; ENSTGUP00000002630; ENSTGUG00000002554
GeneIDi100190713
KEGGitgu:100190713

Organism-specific databases

CTDi5878

Phylogenomic databases

eggNOGiKOG0092 Eukaryota
ENOG410YCCP LUCA
GeneTreeiENSGT00760000119101
HOGENOMiHOG000233968
HOVERGENiHBG009351
KOiK07889
OMAiLIKAKHW
OrthoDBiEOG091G0HKN
TreeFamiTF300199

Enzyme and pathway databases

ReactomeiR-TGU-432722 Golgi Associated Vesicle Biogenesis
R-TGU-6798695 Neutrophil degranulation
R-TGU-8854214 TBC/RABGAPs
R-TGU-8856828 Clathrin-mediated endocytosis
R-TGU-8876198 RAB GEFs exchange GTP for GDP on RABs

Family and domain databases

InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR005225 Small_GTP-bd_dom
IPR001806 Small_GTPase
PfamiView protein in Pfam
PF00071 Ras, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR00231 small_GTP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB5G1H7_TAEGU
AccessioniPrimary (citable) accession number: B5G1H7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: October 10, 2018
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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