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Protein

Pseudouridine synthase

Gene

VFMJ11_1671

Organism
Vibrio fischeri (strain MJ11)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciVFIS388396:G13HN-1671-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:VFMJ11_1671Imported
OrganismiVibrio fischeri (strain MJ11)Imported
Taxonomic identifieri388396 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio
Proteomesi
  • UP000001857 Componenti: Chromosome I

Structurei

3D structure databases

ProteinModelPortaliB5FEZ5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 70S4 RNA-bindingInterPro annotationAdd BLAST62

Sequence similaritiesi

Belongs to the pseudouridine synthase RsuA family.UniRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000044954
KOiK06182
OMAiNAHDKEY
OrthoDBiPOG091H02IO

Family and domain databases

CDDicd00165 S4, 1 hit
Gene3Di3.10.290.10, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR000748 PsdUridine_synth_RsuA/RluB/E/F
IPR018496 PsdUridine_synth_RsuA/RluB_CS
IPR006145 PsdUridine_synth_RsuA/RluD
IPR002942 S4_RNA-bd
IPR036986 S4_RNA-bd_sf
PANTHERiPTHR21600 PTHR21600, 1 hit
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
PF01479 S4, 1 hit
SMARTiView protein in SMART
SM00363 S4, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00093 TIGR00093, 1 hit
PROSITEiView protein in PROSITE
PS01149 PSI_RSU, 1 hit
PS50889 S4, 1 hit

Sequencei

Sequence statusi: Complete.

B5FEZ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSPEPKLTR LNKFISDTGY CSRREADKLI DQQRITINGK IPEMGTKVAD
60 70 80 90 100
GDEVLVDGKP LKEKQDRIYI AFNKPVGITC TTERHVEGNI VDYINHEQRI
110 120 130 140 150
FPIGRLDKPS DGLIFLTNDG DIVNKILRAG NAHEKEYVVR VDKPITDEFL
160 170 180 190 200
QKMAAGVPIL DTVTLPCKIK QESRFVFRIT LTQGLNRQIR RMCEYLDYEV
210 220 230 240 250
FKLKRVRIMN IDLGKLASGE WRYLSQAEMD QLNGMIGTSS KTEEASRKVK
260 270 280 290 300
EIDGKVRVLK KASSGRNHHS NNTFKENRRE KAKEGRFSKS APKRKNDRKE
310
QGKPQSEIKV WRPK
Length:314
Mass (Da):36,073
Last modified:October 14, 2008 - v1
Checksum:iEBAF57B8A13373C2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001139 Genomic DNA Translation: ACH65792.1
RefSeqiWP_005419811.1, NC_011184.1

Genome annotation databases

EnsemblBacteriaiACH65792; ACH65792; VFMJ11_1671
KEGGivfm:VFMJ11_1671

Similar proteinsi

Entry informationi

Entry nameiB5FEZ5_VIBFM
AccessioniPrimary (citable) accession number: B5FEZ5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: May 23, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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