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Protein
Submitted name:

Uncharacterized protein

Gene

Tom1l1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:Tom1l1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1562626 Tom1l1

Subcellular locationi

Expressioni

Gene expression databases

GenevisibleiB5DFM1 RN

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 153VHSInterPro annotationAdd BLAST133
Domaini198 – 286GATInterPro annotationAdd BLAST89

Phylogenomic databases

eggNOGiKOG1087 Eukaryota
ENOG410Y26G LUCA
HOGENOMiHOG000285970
HOVERGENiHBG025068
OMAiYERFTRN

Family and domain databases

Gene3Di1.20.58.160, 1 hit
1.25.40.90, 1 hit
InterProiView protein in InterPro
IPR008942 ENTH_VHS
IPR004152 GAT_dom
IPR038425 GAT_sf
IPR014645 TOM1
IPR027428 TOM1L1
IPR002014 VHS_dom
PANTHERiPTHR13856:SF28 PTHR13856:SF28, 1 hit
PfamiView protein in Pfam
PF03127 GAT, 1 hit
PF00790 VHS, 1 hit
PIRSFiPIRSF036948 TOM1, 1 hit
SMARTiView protein in SMART
SM00288 VHS, 1 hit
SUPFAMiSSF48464 SSF48464, 1 hit
PROSITEiView protein in PROSITE
PS50909 GAT, 1 hit
PS50179 VHS, 1 hit

Sequencei

Sequence statusi: Fragment.

B5DFM1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
AFGKSHRDPY ATSLGHLIEK ATFAGVQTED WGQFMHICDI INTTQDGPKD
60 70 80 90 100
AVKALKKRIS KNYNHKEIQL SLSLIDMCMQ NCGPSFQSLI VKKEFVKDTL
110 120 130 140 150
VKLLNPRYTL PLETQNRILS FIKMWSQGFP GGVDVSEVKE VYLDLLKKGV
160 170 180 190 200
QFPPLDGEPE TKQEAGQISP SRPTSVPTAP ALSSIIAPKN PTISLVPEQI
210 220 230 240 250
GKLHSELDMV KMNVKVMTAI LMENTPGSEN HEDIELLRKL YKTGREMQER
260 270 280 290 300
IMDLLVVVEN EDVTVELIQV NEDLNNAILG YERFTRNQQR LLEQKRNPTE
310 320 330 340 350
ANTSSEPSAP SCDLLNLGPV APVPVSSEGP LNSVNAQLSG LNVSSQSPVI
360 370 380 390 400
TNNLYPSLQP QMDLLASEDT EVPTLFPQRT SQNLASSHTY DNFPDHSSSV
410 420 430 440 450
LLQPVSLHTA PAAPSSQRLP PLPSNHPVLK NSALQPPSYY EVMEFDPLAP
460 470
TTEAIYEEID ASHKKGAQSH SEC
Length:473
Mass (Da):52,291
Last modified:October 14, 2008 - v1
Checksum:i631E5735BFDC8020
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC169112 mRNA Translation: AAI69112.1
RefSeqiNP_001240788.1, NM_001253859.1
UniGeneiRn.200155

Genome annotation databases

GeneIDi287622
KEGGirno:287622

Similar proteinsi

Entry informationi

Entry nameiB5DFM1_RAT
AccessioniPrimary (citable) accession number: B5DFM1
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: March 28, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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