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Protein
Submitted name:

Suppressor of cytokine signaling 4

Gene

Socs4

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Pathwayi: protein ubiquitination

This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.SAAS annotation
View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

UniPathwayiUPA00143

Names & Taxonomyi

Protein namesi
Submitted name:
Suppressor of cytokine signaling 4Imported
Submitted name:
Suppressor of cytokine signaling 4 (Predicted)Imported
Gene namesi
Name:Socs4Imported
Synonyms:Socs4_predictedImported
ORF Names:rCG_61252Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 15

Organism-specific databases

RGDi1306503 Socs4

Subcellular locationi

Expressioni

Gene expression databases

BgeeiENSRNOG00000011377

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000015120

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini283 – 378SH2InterPro annotationAdd BLAST96
Domaini373 – 422SOCS boxInterPro annotationAdd BLAST50

Keywords - Domaini

SH2 domainPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG4566 Eukaryota
ENOG4111V4J LUCA
GeneTreeiENSGT00760000119136
HOGENOMiHOG000027791
HOVERGENiHBG054138
KOiK04697
OMAiESCSDAE
OrthoDBiEOG091G0EQ0
TreeFamiTF321368

Family and domain databases

CDDicd10385 SH2_SOCS4, 1 hit
Gene3Di3.30.505.10, 1 hit
InterProiView protein in InterPro
IPR000980 SH2
IPR036860 SH2_dom_sf
IPR028416 SOCS4
IPR022252 SOCS4/SOCS5_dom
IPR035864 SOCS4_SH2
IPR001496 SOCS_box
IPR036036 SOCS_box-like_dom_sf
PANTHERiPTHR44282:SF2 PTHR44282:SF2, 1 hit
PfamiView protein in Pfam
PF00017 SH2, 1 hit
PF12610 SOCS, 1 hit
PF07525 SOCS_box, 1 hit
SMARTiView protein in SMART
SM00252 SH2, 1 hit
SM00253 SOCS, 1 hit
SM00969 SOCS_box, 1 hit
SUPFAMiSSF158235 SSF158235, 1 hit
SSF55550 SSF55550, 1 hit
PROSITEiView protein in PROSITE
PS50001 SH2, 1 hit
PS50225 SOCS, 1 hit

Sequencei

Sequence statusi: Complete.

B5DF08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAENNSKNVD VRPKTSRSRS ADRKDGYVWS GKKLSWSRKS ESCSESEAVG
60 70 80 90 100
TLESVEIPLR SQERELSCSS IELDLDHSCG HRFLGRSLKQ KLQDAVGQCF
110 120 130 140 150
PIRNCGARHS PGLPSKRTIH ISELMLDKCP FPPPSDLAFR WHFIKRHTVA
160 170 180 190 200
LSSSSDEWVS TDLCERRPRD AQLKRRSTED DIPCFSHTSV QPCVITTNSA
210 220 230 240 250
SCAGGHVTGS LMNLVTDNSM EDGDMDSEDE IITLCTSSRK RNKPRWETDD
260 270 280 290 300
GILQLEAPPK FHTQIDYVHC LVPDLLQISN NPCYWGVMDK YAAEALLEGK
310 320 330 340 350
PEGTFLLRDS AQEDYLFSVS FRRYSRSLHA RIEQWNHNFS FDAHDPCVFH
360 370 380 390 400
SPDITGLLEH YKDPSACMFF EPLLSTPLIR TFPFSLQHIC RTVICNCTTY
410 420 430
DGIDALPIPS PMKLYLKEYH YKSKVRLLRI DVPEPQ
Length:436
Mass (Da):49,606
Last modified:October 14, 2008 - v1
Checksum:iCD79B5B6C2CABFF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07017499 Genomic DNA No translation available.
AABR07017500 Genomic DNA No translation available.
BC168879 mRNA Translation: AAI68879.1
CH474040 Genomic DNA Translation: EDL88347.1
RefSeqiNP_001100726.1, NM_001107256.2
UniGeneiRn.62929

Genome annotation databases

EnsembliENSRNOT00000015120; ENSRNOP00000015120; ENSRNOG00000011377
GeneIDi305828
KEGGirno:305828

Similar proteinsi

Entry informationi

Entry nameiB5DF08_RAT
AccessioniPrimary (citable) accession number: B5DF08
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: July 18, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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