Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Sp2 protein

Gene

Sp2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Sp2 proteinImported
Submitted name:
Sp2 transcription factorImported
Gene namesi
Name:Sp2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi1592078 Sp2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000010492 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000059769

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini524 – 553C2H2-typeInterPro annotationAdd BLAST30
Domaini554 – 583C2H2-typeInterPro annotationAdd BLAST30
Domaini584 – 611C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
HOGENOMiHOG000234295
HOVERGENiHBG008933
OMAiPNCKDAD
OrthoDBiEOG091G0HX6

Family and domain databases

InterProiView protein in InterPro
IPR030451 SP2_TF
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR23235:SF1 PTHR23235:SF1, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

B5DEH3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSDSQMSMAA TAAVSPSDYL QPAAAATQDS QPSPLALLAA TCSKIGPPAV
60 70 80 90 100
EAAVTPPAPP QPTPRKLVPI KPAPLPLSPC KNSFSILSSK GNILQIQGSQ
110 120 130 140 150
LSASYPGGQF VFAIQNPTLI NKGSRSNASI QYQVPQIQGN SSQTIQVQPN
160 170 180 190 200
LTNQIQIIPG TNQAIITPST SGHKPVPIKP APVQKSNTTT TPVQSGANVV
210 220 230 240 250
KLTGGGGNMT LTLPLNNLVN TSDIGAPAQL LTESPPTPLS KTNKKARKKS
260 270 280 290 300
LPVSQPSVAV AEQVETVLIE TTAENIIQAG NNLLIVQSPG GGQPAVVQQV
310 320 330 340 350
QVVPPKAEQQ QVVQIPQQAL RVVQAASATL PTVPQKPSQN FQIQTTEPTP
360 370 380 390 400
TQVYIRTPSG EVQTVLVQDS PPATAATTST VSCSSPALRA PHLSGSSKKH
410 420 430 440 450
SAAILRKERP LPKIAPAGSI ISLNAAQLAA AAQAMQTINI NGVQVQGVPV
460 470 480 490 500
TITNTGGQQQ LTVQNVSGNN LTISGLSPTQ IQLQMEQALA GEAQPGEKRR
510 520 530 540 550
RMACTCPNCK DGEKRSGEQG KKKHVCHIPD CGKTFRKTSL LRAHVRLHTG
560 570 580 590 600
ERPFVCNWFF CGKRFTRSDE LQRHARTHTG DKRFECAQCQ KRFMRSDHLT
610
KHYKTHLGTK GL
Length:612
Mass (Da):64,861
Last modified:October 14, 2008 - v1
Checksum:i8AC3706E91C1F667
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D3ZSM5D3ZSM5_RAT
Sp2 transcription factor
Sp2 Sp2_mapped, rCG_34324
404Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07030423 Genomic DNA No translation available.
BC168669 mRNA Translation: AAI68669.1
RefSeqiXP_006247365.1, XM_006247303.3
UniGeneiRn.229752

Genome annotation databases

EnsembliENSRNOT00000087322; ENSRNOP00000072347; ENSRNOG00000010492
GeneIDi303499

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07030423 Genomic DNA No translation available.
BC168669 mRNA Translation: AAI68669.1
RefSeqiXP_006247365.1, XM_006247303.3
UniGeneiRn.229752

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000059769

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000087322; ENSRNOP00000072347; ENSRNOG00000010492
GeneIDi303499

Organism-specific databases

CTDi6668
RGDi1592078 Sp2

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
HOGENOMiHOG000234295
HOVERGENiHBG008933
OMAiPNCKDAD
OrthoDBiEOG091G0HX6

Gene expression databases

BgeeiENSRNOG00000010492 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

InterProiView protein in InterPro
IPR030451 SP2_TF
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR23235:SF1 PTHR23235:SF1, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiB5DEH3_RAT
AccessioniPrimary (citable) accession number: B5DEH3
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: November 7, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again