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Protein
Submitted name:

Vesicle-associated membrane protein 7

Gene

vamp7

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-XTR-421837 Clathrin derived vesicle budding
R-XTR-432720 Lysosome Vesicle Biogenesis
R-XTR-432722 Golgi Associated Vesicle Biogenesis
R-XTR-8856825 Cargo recognition for clathrin-mediated endocytosis
R-XTR-8856828 Clathrin-mediated endocytosis

Names & Taxonomyi

Protein namesi
Submitted name:
Vesicle-associated membrane protein 7Imported
Gene namesi
Name:vamp7Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-963013 vamp7

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei189 – 214HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSXETG00000018389 Expressed in 11 organ(s), highest expression level in egg cell

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000039822

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 110LonginInterPro annotationAdd BLAST104
Domaini125 – 185V-SNARE coiled-coil homologyInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the synaptobrevin family.SAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0859 Eukaryota
COG5143 LUCA
GeneTreeiENSGT00510000047733
HOGENOMiHOG000042711
HOVERGENiHBG006675
KOiK08515
OMAiFPTERVF
OrthoDBiEOG091G0MPE
TreeFamiTF323448

Family and domain databases

InterProiView protein in InterPro
IPR011012 Longin-like_dom_sf
IPR010908 Longin_dom
IPR001388 Synaptobrevin
PfamiView protein in Pfam
PF13774 Longin, 1 hit
PF00957 Synaptobrevin, 1 hit
PRINTSiPR00219 SYNAPTOBREVN
SMARTiView protein in SMART
SM01270 Longin, 1 hit
SUPFAMiSSF64356 SSF64356, 1 hit
PROSITEiView protein in PROSITE
PS50859 LONGIN, 1 hit
PS00417 SYNAPTOBREVIN, 1 hit
PS50892 V_SNARE, 1 hit

Sequencei

Sequence statusi: Complete.

B5DDY9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAILFAVVAR GTTILAKHAW CGGNFLEVTE QILAKIPSEN NKLTYSHGSY
60 70 80 90 100
LFHYICQDRI IYLCITDDDF ERSRAFNFLN EIKKRFQTTY GSRAQTALPY
110 120 130 140 150
AMNSEFSSVI AAQLKYHSEN KSIDRVAETQ AQVDELKGIM VRNIDLVAQR
160 170 180 190 200
GERLELLIDK TESLVDSSVT FKTTSRNLAR AMCMKNLKLT IIIAIVTIVI
210 220
IYIIVSAACG GLSWPSCVNK
Length:220
Mass (Da):24,727
Last modified:October 14, 2008 - v1
Checksum:i8ADD0FD9275FC45D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01065351 Genomic DNA No translation available.
BC168462 mRNA Translation: AAI68462.1
BC168463 mRNA Translation: AAI68463.1
RefSeqiNP_001135622.1, NM_001142150.1
UniGeneiStr.55549

Genome annotation databases

EnsembliENSXETT00000039822; ENSXETP00000039822; ENSXETG00000018389
GeneIDi100216181
KEGGixtr:100216181

Similar proteinsi

Entry informationi

Entry nameiB5DDY9_XENTR
AccessioniPrimary (citable) accession number: B5DDY9
Entry historyiIntegrated into UniProtKB/TrEMBL: October 14, 2008
Last sequence update: October 14, 2008
Last modified: September 12, 2018
This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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