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Protein
Submitted name:

GH20948

Gene

Dgri\GH20948

Organism
Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi296 – 371Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
GH20948Imported
Gene namesi
Name:Dgri\GH20948Imported
ORF Names:Dgri_GH20948Imported
OrganismiDrosophila grimshawi (Fruit fly) (Idiomyia grimshawi)Imported
Taxonomic identifieri7222 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaHawaiian Drosophila
Proteomesi
  • UP000001070 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi7222.FBpp0154854

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini296 – 371Nuclear receptorInterPro annotationAdd BLAST76
Domaini473 – 708NR LBDInterPro annotationAdd BLAST236

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3575 Eukaryota
ENOG410XRZC LUCA
InParanoidiB4J496
KOiK14034
OMAiKRIMSQP
OrthoDBiEOG091G0KTD
PhylomeDBiB4J496

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR003069 Ecdystd_rcpt
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PRINTSiPR01283 ECDYSTEROIDR
PR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

B4J496-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRRWSNNGG FLRIQEESSS EVTSSSNGLV LSSGINMSPS SLDSHDYGEP
60 70 80 90 100
EMWLCGNDAG GYGNANGNTL GHGNTHTTQQ QQQQQQQQQQ QQSVITLAMQ
110 120 130 140 150
GCSSTLPAQT TIIPINNNNN NNNNNNNNNN SNGYVPGATN LGSLTNGHMG
160 170 180 190 200
SLVSSMQQLQ NGHSHSLINS TTPNMQQNGL NGAATNNGNA NNNNNNSMAL
210 220 230 240 250
NMHHHTNGNS NGHGVGVGVG VGVGLVGGGG GGGVLGAMGG PMGMQAMQHT
260 270 280 290 300
PRSDSANSIS SGRDDLSPSS SLNGYSVNEG CDAKKSKKGP APRVQEELCL
310 320 330 340 350
VCGDRASGYH YNALTCEGCK GFFRRSVTKN AHYCCKFGRA CEMDMYMRRK
360 370 380 390 400
CQECRLKKCL AVGMRPECVV PENQCAMKRR EKKAQKEKDK VTSSPSSQHG
410 420 430 440 450
GAGGGGGGGG GGGIAGGGAC ANSVGLHGTH DYVKKEILDL MTCEPPQHAT
460 470 480 490 500
IPLLPDDILA ECQARNIPPL TFNQLAVIYK LIWYQDGYEQ PSEEDLKRIM
510 520 530 540 550
SQPDEHESQT DVSFRHITEI TILTVQLIVE FAKGLPAFTK IPQEDQITLL
560 570 580 590 600
KACSSEVMML RMARRYDHTS DSIYFANNRS YTRDSYKMAG MADNIEDLLH
610 620 630 640 650
FCRQMFAMKV DNVEYALLTA IVIFSDRPGL EKAQLVEAIQ SYYIDTLRIY
660 670 680 690 700
ILNRHCGNSM SLVFYAKLLS ILTELRTLGN QNAEMCFSLK LKNRKLPKFL
710 720 730 740 750
EEIWDVHAVP PSVQLHLQAQ QDEHDRILRA ERMRGAVGGA IAAGLDADSA
760 770 780 790 800
STSSQAALAA AAQQQQHHQQ QQHQQLHTLP SHTAGAGAGG GGAGSVSAVS
810 820 830 840 850
TSSGYIGGGG AMGPNTAAAS SSTSITAAVP ASSTTPSTVA NGSVGAGGVG
860 870 880 890
GAGGGVGGAG GRNADVSMYA NTQTAMALMG VPLKTEHSTT SSA
Length:893
Mass (Da):94,577
Last modified:September 23, 2008 - v1
Checksum:iA19B0D107ABDCA79
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH916367 Genomic DNA Translation: EDW00576.1
RefSeqiXP_001985709.1, XM_001985673.1

Genome annotation databases

EnsemblMetazoaiFBtr0465282; FBpp0415532; FBgn0128410
FBtr0466995; FBpp0417178; FBgn0128410
GeneIDi6560137
KEGGidgr:Dgri_GH20948

Similar proteinsi

Entry informationi

Entry nameiB4J496_DROGR
AccessioniPrimary (citable) accession number: B4J496
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: July 18, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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