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Protein

Small nuclear ribonucleoprotein G

Gene

Dsec\GM13382

Organism
Drosophila sechellia (Fruit fly)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoproteinUniRule annotationSAAS annotation, RNA-bindingUniRule annotation
Biological processmRNA processing, mRNA splicing

Names & Taxonomyi

Protein namesi
Recommended name:
Small nuclear ribonucleoprotein GUniRule annotation
Short name:
snRNP-GUniRule annotation
Gene namesi
Name:Dsec\GM13382Imported
ORF Names:Dsec_GM13382Imported, GM13382Imported
OrganismiDrosophila sechellia (Fruit fly)Imported
Taxonomic identifieri7238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000001292 Componenti: Unassembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0168313 Dsec\GM13382

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation, SpliceosomeUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliB4IEQ4
SMRiB4IEQ4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 72SmInterPro annotationAdd BLAST66

Sequence similaritiesi

Belongs to the snRNP Sm proteins family.UniRule annotation

Phylogenomic databases

KOiK11099
OMAiMDKEMDL
OrthoDBiEOG091G14J2
PhylomeDBiB4IEQ4

Family and domain databases

CDDicd01719 Sm_G, 1 hit
InterProiView protein in InterPro
IPR001163 LSM_dom_euk/arc
IPR010920 LSM_dom_sf
IPR034098 Sm_G
PfamiView protein in Pfam
PF01423 LSM, 1 hit
SMARTiView protein in SMART
SM00651 Sm, 1 hit
SUPFAMiSSF50182 SSF50182, 1 hit

Sequencei

Sequence statusi: Complete.

B4IEQ4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSKAHPPEVK KYMDKRMMLK LNGGRAVTGI LRGFDPFMNV VLDDTVEECK
60 70
DNTKNNIGMV VIRGNSIVMV EALDRV
Length:76
Mass (Da):8,538
Last modified:September 23, 2008 - v1
Checksum:i1969CF1917F264D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH480832 Genomic DNA Translation: EDW46158.1
RefSeqiXP_002042272.1, XM_002042236.1

Genome annotation databases

EnsemblMetazoaiFBtr0196367; FBpp0194859; FBgn0168313
GeneIDi6617964
KEGGidse:Dsec_GM13382

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH480832 Genomic DNA Translation: EDW46158.1
RefSeqiXP_002042272.1, XM_002042236.1

3D structure databases

ProteinModelPortaliB4IEQ4
SMRiB4IEQ4
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0196367; FBpp0194859; FBgn0168313
GeneIDi6617964
KEGGidse:Dsec_GM13382

Organism-specific databases

FlyBaseiFBgn0168313 Dsec\GM13382

Phylogenomic databases

KOiK11099
OMAiMDKEMDL
OrthoDBiEOG091G14J2
PhylomeDBiB4IEQ4

Family and domain databases

CDDicd01719 Sm_G, 1 hit
InterProiView protein in InterPro
IPR001163 LSM_dom_euk/arc
IPR010920 LSM_dom_sf
IPR034098 Sm_G
PfamiView protein in Pfam
PF01423 LSM, 1 hit
SMARTiView protein in SMART
SM00651 Sm, 1 hit
SUPFAMiSSF50182 SSF50182, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB4IEQ4_DROSE
AccessioniPrimary (citable) accession number: B4IEQ4
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: October 10, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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