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Protein

50S ribosomal protein L10

Gene

rplJ

Organism
Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L10UniRule annotation
Gene namesi
Name:rplJUniRule annotation
Ordered Locus Names:BceJ2315_02270
ORF Names:BCAL0224
OrganismiBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315))
Taxonomic identifieri216591 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000001035 Componenti: Chromosome 1

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001209301 – 16550S ribosomal protein L10Add BLAST165

Interactioni

Subunit structurei

Part of the ribosomal stalk of the 50S ribosomal subunit. The N-terminus interacts with L11 and the large rRNA to form the base of the stalk. The C-terminus forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

Protein-protein interaction databases

STRINGi216591.BCAL0224

Structurei

3D structure databases

SMRiB4E5B0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL10 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108VZM Bacteria
COG0244 LUCA
HOGENOMiHOG000004851
KOiK02864
OMAiNAPAKVI
OrthoDBiPOG091H02JR

Family and domain databases

HAMAPiMF_00362 Ribosomal_L10, 1 hit
InterProiView protein in InterPro
IPR022973 Ribosomal_L10
IPR001790 Ribosomal_L10P
PANTHERiPTHR11560 PTHR11560, 1 hit
PfamiView protein in Pfam
PF00466 Ribosomal_L10, 1 hit

Sequencei

Sequence statusi: Complete.

B4E5B0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPLNREDKQA VVAEVSAQVA KAQTVVLAEY RGIAVGDLTK LRAQAREQKV
60 70 80 90 100
YLRVLKNTLA RRAVEGTPFA PLAEQMTGPL IYGISEDAIA AAKVVNDFSK
110 120 130 140 150
SNDKLVIKAG SFDGKVMDKA GVQALASIPS REELLSKLLF VMQAPVSGFA
160
RALAALAEKK QAEAA
Length:165
Mass (Da):17,609
Last modified:September 23, 2008 - v1
Checksum:i8986CB90EBEECD4B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747720 Genomic DNA Translation: CAR50535.1
RefSeqiWP_006482916.1, NC_011000.1

Genome annotation databases

EnsemblBacteriaiCAR50535; CAR50535; BCAL0224
KEGGibcj:BCAL0224

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM747720 Genomic DNA Translation: CAR50535.1
RefSeqiWP_006482916.1, NC_011000.1

3D structure databases

SMRiB4E5B0
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216591.BCAL0224

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAR50535; CAR50535; BCAL0224
KEGGibcj:BCAL0224

Phylogenomic databases

eggNOGiENOG4108VZM Bacteria
COG0244 LUCA
HOGENOMiHOG000004851
KOiK02864
OMAiNAPAKVI
OrthoDBiPOG091H02JR

Family and domain databases

HAMAPiMF_00362 Ribosomal_L10, 1 hit
InterProiView protein in InterPro
IPR022973 Ribosomal_L10
IPR001790 Ribosomal_L10P
PANTHERiPTHR11560 PTHR11560, 1 hit
PfamiView protein in Pfam
PF00466 Ribosomal_L10, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL10_BURCJ
AccessioniPrimary (citable) accession number: B4E5B0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: September 23, 2008
Last modified: October 10, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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