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Protein
Submitted name:

cDNA FLJ53495, highly similar to Polymerase I and transcript release factor

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
cDNA FLJ53495, highly similar to Polymerase I and transcript release factorImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiB4DPZ5
PeptideAtlasiB4DPZ5
PRIDEiB4DPZ5

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili72 – 92Sequence analysisAdd BLAST21
Coiled coili172 – 192Sequence analysisAdd BLAST21
Coiled coili211 – 253Sequence analysisAdd BLAST43

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOGENOMiHOG000293135
HOVERGENiHBG056807

Family and domain databases

InterProiView protein in InterPro
IPR033297 Cavin-1
IPR026752 Cavin_fam
PANTHERiPTHR15240 PTHR15240, 2 hits
PTHR15240:SF3 PTHR15240:SF3, 2 hits
PfamiView protein in Pfam
PF15237 PTRF_SDPR, 2 hits

Sequencei

Sequence statusi: Complete.

B4DPZ5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDPTLYIVE RPLPGYPDAE APEPSSAGAQ AAEEPSGAGS EELIKSDQVN
60 70 80 90 100
GVLVLSLLDK IIGAVDQIQL TQAQLEERQA EMEGAVQSIQ GELSKLGKAH
110 120 130 140 150
ATTSNTVIKK LEVNEAELLR RRNFKVMIYQ DEVKLPAKLS ISKSLKESEA
160 170 180 190 200
LPEKEGEELG EGERPEEDAA ALELSSDEAV EVEEVIEESR AERIKRSGLR
210 220 230 240 250
RVDDFKKAFS KEKMEKTKVR TRENLEKTRL KTKENLEKTR HTLEKRMNKL
260 270 280 290 300
GTRLVPAERR EKLKTSRDKL RKSFTPDHVV YARSKTAVYK VPPFTFHVKK
310 320 330 340 350
IREGQVEVLK ATEMVEVGAD DDEGGAERGE AGDLRRGSSP DVHALLEITE
360
ESDAVLVDKS DSD
Length:363
Mass (Da):40,484
Last modified:September 23, 2008 - v1
Checksum:i4BD4534D641B3EAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK298563 mRNA Translation: BAG60757.1
UniGeneiHs.437191

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK298563 mRNA Translation: BAG60757.1
UniGeneiHs.437191

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiB4DPZ5
PeptideAtlasiB4DPZ5
PRIDEiB4DPZ5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOGENOMiHOG000293135
HOVERGENiHBG056807

Family and domain databases

InterProiView protein in InterPro
IPR033297 Cavin-1
IPR026752 Cavin_fam
PANTHERiPTHR15240 PTHR15240, 2 hits
PTHR15240:SF3 PTHR15240:SF3, 2 hits
PfamiView protein in Pfam
PF15237 PTRF_SDPR, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiB4DPZ5_HUMAN
AccessioniPrimary (citable) accession number: B4DPZ5
Entry historyiIntegrated into UniProtKB/TrEMBL: September 23, 2008
Last sequence update: September 23, 2008
Last modified: December 20, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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