UniProtKB - B4DM30 (B4DM30_HUMAN)
Protein
RNA helicase
Gene
DHX38
Organism
Homo sapiens (Human)
Status
Functioni
Catalytic activityi
- EC:3.6.4.13ARBA annotation
GO - Molecular functioni
- ATP binding Source: UniProtKB-KW
- nucleic acid binding Source: InterPro
- RNA helicase activity Source: UniProtKB-EC
Keywordsi
Molecular function | HelicaseImportedARBA annotation, Hydrolase |
Ligand | ATP-binding, Nucleotide-binding |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Name:DHX38Imported ORF Names:hCG_33013Imported |
Organismi | Homo sapiens (Human)Imported |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 215 – 378 | Helicase ATP-bindingInterPro annotationAdd BLAST | 164 | |
Domaini | 400 – 575 | Helicase C-terminalInterPro annotationAdd BLAST | 176 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 828 – 900 | DisorderedSequence analysisAdd BLAST | 73 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 29 – 49 | Sequence analysisAdd BLAST | 21 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 829 – 869 | PolyampholyteSequence analysisAdd BLAST | 41 |
Keywords - Domaini
Coiled coilSequence analysisFamily and domain databases
InterProi | View protein in InterPro IPR011545, DEAD/DEAH_box_helicase_dom IPR002464, DNA/RNA_helicase_DEAH_CS IPR011709, DUF1605 IPR007502, Helicase-assoc_dom IPR014001, Helicase_ATP-bd IPR001650, Helicase_C IPR027417, P-loop_NTPase |
Pfami | View protein in Pfam PF00270, DEAD, 1 hit PF04408, HA2, 1 hit PF00271, Helicase_C, 1 hit PF07717, OB_NTP_bind, 1 hit |
SMARTi | View protein in SMART SM00487, DEXDc, 1 hit SM00847, HA2, 1 hit SM00490, HELICc, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
PROSITEi | View protein in PROSITE PS00690, DEAH_ATP_HELICASE, 1 hit PS51192, HELICASE_ATP_BIND_1, 1 hit PS51194, HELICASE_CTER, 1 hit |
i Sequence
Sequence statusi: Complete.
B4DM30-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MMDEGYDEFH NPLAYSSEDY VRRREQHLHK QKQKRISAQR RQINEDNERW
60 70 80 90 100
ETNRMLTSGV VHRLEVDEDF EEDNAAKVHL MVHNLVPPFL DGRIVFTKQP
110 120 130 140 150
EPVIPVKDAT SDLAIIARKG SQTVRKHREQ KERKKAQHKH WELAGTKLGD
160 170 180 190 200
IMGVKKEEEP DKAVTEDGKV DYRTEQKFAD HMKRKSEASS EFAKKKSILE
210 220 230 240 250
QRQYLPIFAV QQELLTIIRD NSIVIVVGET GSGKTTQLTQ YLHEDGYTDY
260 270 280 290 300
GMIGCTQPRR VAAMSVAKRV SEEMGGNLGE EVGYAIRFED CTSENTLIKY
310 320 330 340 350
MTDGILLRES LREADLDHYS AIIMDEAHER SLNTDVLFGL LREVVARRSD
360 370 380 390 400
LKLIVTSATM DAEKFAAFFG NVPIFHIPGR TFPVDILFSK TPQEDYVEAA
410 420 430 440 450
VKQSLQVHLS GAPGDILIFM PGQEDIEVTS DQIVEHLEEL ENAPALAVLP
460 470 480 490 500
IYSQLPSDLQ AKIFQKAPDG VRKCIVATNI AETSLTVDGI MFVIDSGYCK
510 520 530 540 550
LKVFNPRIGM DALQIYPISQ ANANQRSGRA GRTGPGQCFR LYTQSAYKNE
560 570 580 590 600
LLTTTVPEIQ RTNLANVVLL LKSLGVQDLL QFHFMDPPPE DNMLNSMYQL
610 620 630 640 650
WILGALDNTG GLTSTGRLMV EFPLDPALSK MLIVSCDMGC SSEILLIVSM
660 670 680 690 700
LSVPAIFYRP KGREEESDQI REKFAVPESD HLTYLNVYLQ WKNNNYSTIW
710 720 730 740 750
CNDHFIHAKA MRKVREVRAQ LKDIMVQQRM SLASCGTDWD IVRKCICAAY
760 770 780 790 800
FHQAAKLKGI GEYVNIRTGM PCHLHPTSSL FGMGYTPDYI VYHELVMTTK
810 820 830 840 850
EYMQCVTAVD GEWLAELGPM FYSVKQAGKS RQENRRRAKE EASAMEEEMA
860 870 880 890 900
LAEEQLRARR QEQEKRSPLG SVRSTKIYTP GRKEQGEPMT PRRTPARFGL
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AK297269 mRNA Translation: BAG59742.1 CH471166 Genomic DNA Translation: EAW59183.1 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AK297269 mRNA Translation: BAG59742.1 CH471166 Genomic DNA Translation: EAW59183.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Proteomic databases
PeptideAtlasi | B4DM30 |
Miscellaneous databases
ChiTaRSi | DHX38, human |
Family and domain databases
InterProi | View protein in InterPro IPR011545, DEAD/DEAH_box_helicase_dom IPR002464, DNA/RNA_helicase_DEAH_CS IPR011709, DUF1605 IPR007502, Helicase-assoc_dom IPR014001, Helicase_ATP-bd IPR001650, Helicase_C IPR027417, P-loop_NTPase |
Pfami | View protein in Pfam PF00270, DEAD, 1 hit PF04408, HA2, 1 hit PF00271, Helicase_C, 1 hit PF07717, OB_NTP_bind, 1 hit |
SMARTi | View protein in SMART SM00487, DEXDc, 1 hit SM00847, HA2, 1 hit SM00490, HELICc, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
PROSITEi | View protein in PROSITE PS00690, DEAH_ATP_HELICASE, 1 hit PS51192, HELICASE_ATP_BIND_1, 1 hit PS51194, HELICASE_CTER, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | B4DM30_HUMAN | |
Accessioni | B4DM30Primary (citable) accession number: B4DM30 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | September 23, 2008 |
Last sequence update: | September 23, 2008 | |
Last modified: | October 7, 2020 | |
This is version 71 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |