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Protein
Submitted name:

Homeobox protein HoxB3ab

Gene

HoxB3ab

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi166 – 225HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinSAAS annotation, DNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Homeobox protein HoxB3abImported
Submitted name:
Homeobox protien HoxB3abImported
Gene namesi
Name:HoxB3abImported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini164 – 224HomeoboxInterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the Antp homeobox family.SAAS annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotationImported

Phylogenomic databases

HOVERGENiHBG107984
KOiK09303

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR025281 DUF4074
IPR009057 Homeobox-like_sf
IPR001827 Homeobox_Antennapedia_CS
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR020479 Homeobox_metazoa
PfamiView protein in Pfam
PF13293 DUF4074, 1 hit
PF00046 Homeobox, 1 hit
PRINTSiPR00024 HOMEOBOX
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00032 ANTENNAPEDIA, 1 hit
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

B3SUF7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKTTYYDNS TLFGGYSYQG ANGFGYDAPQ PAFQSAAHLE GDYQRSACSL
60 70 80 90 100
QSLGGNSAPP QQHAKTKELN GSCMRPSLPP EHQPPPQVSP PVIPANATSS
110 120 130 140 150
SATATSSSAT AQQPGGSGGA AKSAPKTYTL STNPTLNKQI FPWMKESRQN
160 170 180 190 200
TKQKNSSPSA SSANASKRAR TAYTSAQLVE LEKEFHFNRY LCRPRRVEMA
210 220 230 240 250
NLLNLSERQI KIWFQNRRMK YKKDQKCKGL GSSSGGPSPT GSPPLPMQSS
260 270 280 290 300
AGFMNSMHSM AGNYDAPSPP SFNKSHQNAY AMSSAYQNPM KSCPSQQKYA
310 320 330 340 350
NTAPEYDPHG LQGNSGNYGT PNMQGSPVYV GGNYVESMPT SGPSMYGLNH
360 370 380 390 400
LPHHQAGNMD YNGATQMSAS QHHGPCDPHP TYTELAAHHP SQGRIQEAPK

LTHL
Length:404
Mass (Da):43,596
Last modified:September 2, 2008 - v1
Checksum:i82F49CF95593838D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF695339 mRNA Translation: ABV82074.1
EU025707 Genomic DNA Translation: ABW77480.1
RefSeqiNP_001165253.1, NM_001171782.1
UniGeneiSsa.49612

Genome annotation databases

GeneIDi100329173
KEGGisasa:100329173

Similar proteinsi

Entry informationi

Entry nameiB3SUF7_SALSA
AccessioniPrimary (citable) accession number: B3SUF7
Entry historyiIntegrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: March 28, 2018
This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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