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Protein

tRNA pseudouridine synthase A

Gene

truA

Organism
Rhodopseudomonas palustris (strain TIE-1)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.UniRule annotationSAAS annotation

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

Catalytic activityi

tRNA uridine(38-40) = tRNA pseudouridine(38-40).UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei52NucleophileUniRule annotation1
Binding sitei111SubstrateUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported
Biological processtRNA processingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciRPAL395960:RPAL_RS03170-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase AUniRule annotation (EC:5.4.99.12UniRule annotation)
Alternative name(s):
tRNA pseudouridine(38-40) synthaseUniRule annotation
tRNA pseudouridylate synthase IUniRule annotation
tRNA-uridine isomerase IUniRule annotation
Gene namesi
Name:truAUniRule annotation
Ordered Locus Names:Rpal_0627Imported
OrganismiRhodopseudomonas palustris (strain TIE-1)Imported
Taxonomic identifieri395960 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
Proteomesi
  • UP000001725 Componenti: Chromosome

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 104PseudoU_synth_1InterPro annotationAdd BLAST96
Domaini144 – 245PseudoU_synth_1InterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the tRNA pseudouridine synthase TruA family.UniRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000248674
KOiK06173
OMAiFLYGMVR
OrthoDBiPOG091H010Q

Family and domain databases

Gene3Di3.30.70.660, 1 hit
HAMAPiMF_00171 TruA, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR001406 PsdUridine_synth_TruA
IPR020097 PsdUridine_synth_TruA_a/b_dom
IPR020095 PsdUridine_synth_TruA_C
PANTHERiPTHR11142 PTHR11142, 1 hit
PfamiView protein in Pfam
PF01416 PseudoU_synth_1, 2 hits
PIRSFiPIRSF001430 tRNA_psdUrid_synth, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00071 hisT_truA, 1 hit

Sequencei

Sequence statusi: Complete.

B3QCH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRYKLTIEY DGAPFCGWQL QPALPSVQGA LEVAALATCG EAVRVHGAGR
60 70 80 90 100
TDAGVHALGQ VAHVDIPKPF RADKLRDALN AHLRPNPVAV LAAEIVPDTF
110 120 130 140 150
EARFSAVRRH YRYRIANRRS NLALDLGKVW RVPKQLDTDA MHRAAQVLIG
160 170 180 190 200
KHDFTTFRDT ECQAASPEKT LDVLDVVRDG DAVDIITNAR SYLHSQVRSM
210 220 230 240
VGSLVWVGEG RWTADDLAAA LAARRRSACG PVAPPEGLYL MQVDY
Length:245
Mass (Da):26,886
Last modified:September 2, 2008 - v1
Checksum:i7A3F4C51F4CA9631
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001096 Genomic DNA Translation: ACE99186.1
RefSeqiWP_012494285.1, NC_011004.1

Genome annotation databases

EnsemblBacteriaiACE99186; ACE99186; Rpal_0627
KEGGirpt:Rpal_0627

Similar proteinsi

Entry informationi

Entry nameiB3QCH3_RHOPT
AccessioniPrimary (citable) accession number: B3QCH3
Entry historyiIntegrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: July 18, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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