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Entry version 76 (11 Dec 2019)
Sequence version 1 (02 Sep 2008)
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Protein
Submitted name:

Endo-chitinase, putative, chi18B

Gene

chi18B

Organism
Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

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BioCyci
CJAP498211:G1GB3-1006-MONOMER

Protein family/group databases

Carbohydrate-Active enZymes

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CAZyi
CBM5 Carbohydrate-Binding Module Family 5
CBM73 Carbohydrate-Binding Module Family 73
GH18 Glycoside Hydrolase Family 18

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Endo-chitinase, putative, chi18BImported (EC:3.2.1.14Imported)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:chi18BImported
Ordered Locus Names:CJA_0988Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri498211 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaCellvibrionalesCellvibrionaceaeCellvibrio
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001036 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 22Sequence analysisAdd BLAST22
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_500279649723 – 890Sequence analysisAdd BLAST868

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
498211.CJA_0988

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
B3PB16

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini28 – 75Chitin-binding type-3InterPro annotationAdd BLAST48
Domaini186 – 627Glyco_18InterPro annotationAdd BLAST442
Domaini845 – 887Chitin-binding type-3InterPro annotationAdd BLAST43

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni809 – 833DisorderedSequence analysisAdd BLAST25

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410662T Bacteria
COG3325 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000282375

KEGG Orthology (KO)

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KOi
K01183

Identification of Orthologs from Complete Genome Data

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OMAi
WAGNPSH

Database of Orthologous Groups

More...
OrthoDBi
1081028at2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR032798 CBM_5_12_2
IPR003610 CBM_fam5/12
IPR036573 CBM_sf_5/12
IPR009470 Chi_C
IPR011583 Chitinase_II
IPR029070 Chitinase_insertion_sf
IPR001223 Glyco_hydro18_cat
IPR017853 Glycoside_hydrolase_SF

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF14600 CBM_5_12_2, 1 hit
PF06483 ChiC, 1 hit
PF00704 Glyco_hydro_18, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00495 ChtBD3, 2 hits
SM00636 Glyco_18, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF51055 SSF51055, 1 hit
SSF51445 SSF51445, 1 hit
SSF54556 SSF54556, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B3PB16-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRKIFTLAML GSAALWAASS QAYDCTNVPQ YANGSSYATG AIVKNQGNAY
60 70 80 90 100
QCTVGGWCTV GGPYEPGVGW AYTNAWSGLG ACNSTGSSSV ASSVISSVQS
110 120 130 140 150
SSVQSSVISS VSSVSSSVVV SSSVVSSVIS SSSSSIASSL SSASSSVIVS
160 170 180 190 200
GNEACRPDGL YRTPGQDVPY CSVYDSEGRE KMAIDRRIIG YFPSWRLGAN
210 220 230 240 250
GTPRYLANNI PWGKITHINY AFAHIENNKI SVGDVTSPSN PSTGLTWPDV
260 270 280 290 300
PGAEMDPSLS YKGHFNLLTK FKKQYPQVKT MISVGGWAET GGYFDGNGER
310 320 330 340 350
VASGGFYTLT DSQANIDTFA DSVVAFLRTY HFDGADIDYE YATSMKDAGN
360 370 380 390 400
PADWSIANAR RAKLMSGYVA LMKTLREKLD AASVQDGKHY LLTVAAPSSG
410 420 430 440 450
YLLRGMDMYQ VTQYLDYVNI MSYDLHGAWN EFVGPQAPLF DDGNDGELQK
460 470 480 490 500
WSFYSAYGIG YLNTDWGYHY FRGSMPAGRI NIGVPYYTRG WRDVSGGTNG
510 520 530 540 550
FWGKSPTSNQ CAVGLTVCGK GAVGIDNIWH DIENGAEVAA GANPMWHAKN
560 570 580 590 600
LERNIAASYL SAYNLSAANL VGTYQRFYDP VTVSPWLWNA TTKVFISTED
610 620 630 640 650
EESLRTKADY VIDKGIGGIM FWELSGDFAC PNDPTQACTV GDTMTTVLYE
660 670 680 690 700
KFADTSVYGA RKANRTMPTE TLAMSFSLGD YPVGDSNFPI TGKLTLTNNS
710 720 730 740 750
PLTIPGGAVF EFDYGTSDTG NIGDQSGLAI QNIEVGHTGN NIGTGLDSDF
760 770 780 790 800
NRARFSLPGY ETLAPGASRT FTFTQKLPTS MYSNWTVTFG GKTYALSFDY
810 820 830 840 850
ARGAVLATSS SSSSSSSSTG NSSSSSSSST GSCTDGVNVY PNWPQKDWAG
860 870 880 890
NPSHAVGGDK MAYQGSVYRA NWWTNSIPGS DGSWTFVCSD
Length:890
Mass (Da):95,257
Last modified:September 2, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD8FF6B7E191421ED
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP000934 Genomic DNA Translation: ACE84354.1

NCBI Reference Sequences

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RefSeqi
WP_012486636.1, NC_010995.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ACE84354; ACE84354; CJA_0988

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
cja:CJA_0988

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000934 Genomic DNA Translation: ACE84354.1
RefSeqiWP_012486636.1, NC_010995.1

3D structure databases

SMRiB3PB16
ModBaseiSearch...

Protein-protein interaction databases

STRINGi498211.CJA_0988

Protein family/group databases

CAZyiCBM5 Carbohydrate-Binding Module Family 5
CBM73 Carbohydrate-Binding Module Family 73
GH18 Glycoside Hydrolase Family 18

Genome annotation databases

EnsemblBacteriaiACE84354; ACE84354; CJA_0988
KEGGicja:CJA_0988

Phylogenomic databases

eggNOGiENOG410662T Bacteria
COG3325 LUCA
HOGENOMiHOG000282375
KOiK01183
OMAiWAGNPSH
OrthoDBi1081028at2

Enzyme and pathway databases

BioCyciCJAP498211:G1GB3-1006-MONOMER

Family and domain databases

InterProiView protein in InterPro
IPR032798 CBM_5_12_2
IPR003610 CBM_fam5/12
IPR036573 CBM_sf_5/12
IPR009470 Chi_C
IPR011583 Chitinase_II
IPR029070 Chitinase_insertion_sf
IPR001223 Glyco_hydro18_cat
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF14600 CBM_5_12_2, 1 hit
PF06483 ChiC, 1 hit
PF00704 Glyco_hydro_18, 1 hit
SMARTiView protein in SMART
SM00495 ChtBD3, 2 hits
SM00636 Glyco_18, 1 hit
SUPFAMiSSF51055 SSF51055, 1 hit
SSF51445 SSF51445, 1 hit
SSF54556 SSF54556, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB3PB16_CELJU
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B3PB16
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: September 2, 2008
Last sequence update: September 2, 2008
Last modified: December 11, 2019
This is version 76 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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