Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Vegetative storage protein 1

Gene

VSP1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Vegetative storage protein 1Imported
Gene namesi
Name:VSP1Imported
Synonyms:ATVSP1Imported, VEGETATIVE STORAGE PROTEIN 1Imported, vegetative storage protein 1Imported
Ordered Locus Names:At5g24780Imported
ORF Names:T4C12.50Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G24780

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500278789322 – 225Sequence analysisAdd BLAST204

Proteomic databases

PRIDEiB3H5J6

Expressioni

Gene expression databases

ExpressionAtlasiB3H5J6 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliB3H5J6
SMRiB3H5J6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IK9U Eukaryota
ENOG4111X3R LUCA
HOGENOMiHOG000237598

Family and domain databases

Gene3Di3.40.50.1000, 1 hit
InterProiView protein in InterPro
IPR005519 Acid_phosphat_B-like
IPR014403 APS1/VSP
IPR036412 HAD-like_sf
IPR023214 HAD_sf
PfamiView protein in Pfam
PF03767 Acid_phosphat_B, 1 hit
PIRSFiPIRSF002674 VSP, 1 hit
SUPFAMiSSF56784 SSF56784, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

B3H5J6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKILSLSLLL LLAATVSHVQ SSASVPGLIE LLESNTIFGN EAELLEKEGL
60 70 80 90 100
SINYPNCRSW HLGVETSNII NFDTVPANCK AYVEDYLITS KQYQYDSKTV
110 120 130 140 150
NKEAYFYAKG LALKNDTVNV WIFDLDDTLL SSIPYYAKYG YGTENTAPGA
160 170 180 190 200
YWSWLESGES TPGLPETLHL YENLLELGIE PIIISDRWKK LSEVTVENLK
210 220
AVGVTKWKHL ILKTIYGNAG QTDRS
Length:225
Mass (Da):25,180
Last modified:July 22, 2008 - v1
Checksum:i34AABC7821D2E425
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
O49195VSP1_ARATH
Vegetative storage protein 1
VSP1 At5g24780, T4C12
270Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002688 Genomic DNA Translation: AED93361.1
RefSeqiNP_001119273.1, NM_001125801.1
UniGeneiAt.23512

Genome annotation databases

EnsemblPlantsiAT5G24780.2; AT5G24780.2; AT5G24780
GeneIDi832547
GrameneiAT5G24780.2; AT5G24780.2; AT5G24780

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002688 Genomic DNA Translation: AED93361.1
RefSeqiNP_001119273.1, NM_001125801.1
UniGeneiAt.23512

3D structure databases

ProteinModelPortaliB3H5J6
SMRiB3H5J6
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB3H5J6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G24780.2; AT5G24780.2; AT5G24780
GeneIDi832547
GrameneiAT5G24780.2; AT5G24780.2; AT5G24780

Organism-specific databases

AraportiAT5G24780

Phylogenomic databases

eggNOGiENOG410IK9U Eukaryota
ENOG4111X3R LUCA
HOGENOMiHOG000237598

Gene expression databases

ExpressionAtlasiB3H5J6 baseline and differential

Family and domain databases

Gene3Di3.40.50.1000, 1 hit
InterProiView protein in InterPro
IPR005519 Acid_phosphat_B-like
IPR014403 APS1/VSP
IPR036412 HAD-like_sf
IPR023214 HAD_sf
PfamiView protein in Pfam
PF03767 Acid_phosphat_B, 1 hit
PIRSFiPIRSF002674 VSP, 1 hit
SUPFAMiSSF56784 SSF56784, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB3H5J6_ARATH
AccessioniPrimary (citable) accession number: B3H5J6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: September 12, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again