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Protein
Submitted name:

Ribosomal protein S25 family protein

Gene

At4g39200

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein S25 family proteinImported
Gene namesi
Ordered Locus Names:At4g39200Imported
ORF Names:T22F8.100Imported, T22F8_100Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G39200

Subcellular locationi

PTM / Processingi

Proteomic databases

PRIDEiB3H4B6

Expressioni

Gene expression databases

ExpressionAtlasiB3H4B6 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliB3H4B6
SMRiB3H4B6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000203673

Family and domain databases

InterProiView protein in InterPro
IPR004977 Ribosomal_S25
PANTHERiPTHR12850 PTHR12850, 1 hit
PfamiView protein in Pfam
PF03297 Ribosomal_S25, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012268 Ribosomal_S25, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

B3H4B6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAPKKDKVPP PSSKPAKSGG GKQKKKWSKG KQKEKVNNMV LFDQATYDKL
60 70 80 90 100
LTEAPKFKLI TPSILSDRMR INGSLARRAI RELMAKGVIR MVAAHSSQQI

YTRATNT
Length:107
Mass (Da):11,925
Last modified:July 22, 2008 - v1
Checksum:iC4B1B55A47AC93F8
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9T029RS254_ARATH
40S ribosomal protein S25-4
RPS25E At4g39200, T22F8.100
108Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002687 Genomic DNA Translation: AEE87037.1
RefSeqiNP_001119144.1, NM_001125672.1
UniGeneiAt.22591

Genome annotation databases

EnsemblPlantsiAT4G39200.2; AT4G39200.2; AT4G39200
GeneIDi830075
GrameneiAT4G39200.2; AT4G39200.2; AT4G39200

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002687 Genomic DNA Translation: AEE87037.1
RefSeqiNP_001119144.1, NM_001125672.1
UniGeneiAt.22591

3D structure databases

ProteinModelPortaliB3H4B6
SMRiB3H4B6
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiB3H4B6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G39200.2; AT4G39200.2; AT4G39200
GeneIDi830075
GrameneiAT4G39200.2; AT4G39200.2; AT4G39200

Organism-specific databases

AraportiAT4G39200

Phylogenomic databases

HOGENOMiHOG000203673

Gene expression databases

ExpressionAtlasiB3H4B6 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR004977 Ribosomal_S25
PANTHERiPTHR12850 PTHR12850, 1 hit
PfamiView protein in Pfam
PF03297 Ribosomal_S25, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012268 Ribosomal_S25, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB3H4B6_ARATH
AccessioniPrimary (citable) accession number: B3H4B6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: April 25, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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