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Protein
Submitted name:

Uncharacterized protein

Gene

mycn

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:mycnImported
ORF Names:XELAEV_18028073mgImported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus
Proteomesi
  • UP000186698 Componenti: Chromosome 5l

Organism-specific databases

XenbaseiXB-GENE-6464367 mycn

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

SMRiB3DLS5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini354 – 406BHLHInterPro annotationAdd BLAST53

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili237 – 257Sequence analysisAdd BLAST21
Coiled coili410 – 430Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

HOVERGENiHBG000472
KOiK09109

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR002418 Tscrpt_reg_Myc
IPR012682 Tscrpt_reg_Myc_N
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF01056 Myc_N, 1 hit
PIRSFiPIRSF001705 Myc_protein, 1 hit
PRINTSiPR00044 LEUZIPPRMYC
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

B3DLS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGLVSRNLD LEFDSLQPCF YPDEDDFYLC DPDSAPPGED IWKKFELLPT
60 70 80 90 100
PPLSPSRSGL HGDPLSPGLP GDYGDSVDWA SELLVLPPEA DLLGGSGWGE
110 120 130 140 150
LGLSPCNVKS IIIQDCMWSG FSAREKLERA VSEKLGKASC TPEPTIPHPP
160 170 180 190 200
SSTVGSSVSG RGVDMNNPAA HCVDPAVVFP FPFNKGESCR TAPSSANPPP
210 220 230 240 250
CTTTTVPTST TARNCTQPCT SSSSSGEESH SESDDDEDEE EEEEDDEEEE
260 270 280 290 300
IDVVTVEKRR NSSNKSVTSL TITVRPKNTI LVSSKTAQNE VILKRCAPVH
310 320 330 340 350
QQHNYAAPSP YVETEEVAPP QKKLRNELPR LVKNVVPTKP KSSSPRNYDS
360 370 380 390 400
EDSERRRNHN ILERQRRNDL RSSFLTLRDH VPELIKNEKA AKVVILKKAT
410 420 430
EYVHSLHADE QKLLLEKEKL QLRQQQLLKK IEHLRTC
Length:437
Mass (Da):48,406
Last modified:July 22, 2008 - v1
Checksum:iC4D6EEC0636E6F04
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC167562 mRNA Translation: AAI67562.1
CM004474 Genomic DNA Translation: OCT81256.1
RefSeqiNP_001165460.1, NM_001171989.1
XP_018117080.1, XM_018261591.1
UniGeneiXl.70037

Genome annotation databases

GeneIDi100337516
KEGGixla:100337516

Similar proteinsi

Entry informationi

Entry nameiB3DLS5_XENLA
AccessioniPrimary (citable) accession number: B3DLS5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 22, 2008
Last sequence update: July 22, 2008
Last modified: February 28, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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