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Protein

DNA ligase

Gene

PTRG_00747

Organism
Pyrenophora tritici-repentis (strain Pt-1C-BFP) (Wheat tan spot fungus) (Drechslera tritici-repentis)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotationImported
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PTRG_00747Imported
OrganismiPyrenophora tritici-repentis (strain Pt-1C-BFP) (Wheat tan spot fungus) (Drechslera tritici-repentis)Imported
Taxonomic identifieri426418 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
Proteomesi
  • UP000001471 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi426418.XP_001931080.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini635 – 772DNA_LIGASE_A3InterPro annotationAdd BLAST138

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0967 Eukaryota
COG1793 LUCA
InParanoidiB2VSW3
OrthoDBiEOG092C0FHN

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 2 hits
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

B2VSW3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPPKQATLGK FFGKANGDGA KQQSKLSFST KPKPMKKEEL QPSPEDVKTE
60 70 80 90 100
QKDEVDSDAD VKAPAKEEVE ADGDAMEVDS TTSETGKKRQ IKEEEEEVDS
110 120 130 140 150
EEEPPSKRQR RKPSEDKEKP KKKTAAKPKA EKSTAKSKKV TTKSSSVDPE
160 170 180 190 200
DGDVSAPTKV AKGKKKAATK PKAAEVDSDE ASAPAKVAKG RKKEIENSPA
210 220 230 240 250
PAEDEVDSNK EEEDVLSSEE EEVKVKARKQ VQTTLTSNTK DPYPDWKPGE
260 270 280 290 300
PVPYAALCTT FSKIEMTTKR LEILAHCSLF LRQVLRLTPK DMLPTVMLMV
310 320 330 340 350
NKLAADYAGI ELGIGESLIM KAVSESTGRN LQQIKTDQNE IGDLGLVAAK
360 370 380 390 400
SRSKQPTMFK PKALTVEGVR KGLMGIAIVE GQGAQGRKVD GIKKLLSAAD
410 420 430 440 450
AHNSGKAIDI EKDKGGPSEA KFIVRTLEGK LRLGLAEKTV VVAVAQAMIF
460 470 480 490 500
HEMSLEGKTP STTDLAKAEA MLKTVYSELP SYEVIIPAML EHGIMNLREN
510 520 530 540 550
CRLQPGVPLK PMLAKPTKSI TEVLDRFEGK DFTCEYKYDG ERAQIHFVAH
560 570 580 590 600
DADMELATAA PTAGKSDRGV SNIFSRNSED LSKKYPDILA KLPTWVKEGT
610 620 630 640 650
KSFVLDCETV AWDMVEKKVL PFQQLMTRKR KDVKVEDVKV KVCVFAFDLL
660 670 680 690 700
YLNGEALVTK SFRERREHLN EAFIPVEGEF ALAKFGNTNE LEEIQTLLED
710 720 730 740 750
SVKEGCEGLM VKMLDGPESF YEPSKRSQNW LKVKKDYLAG VGDSLDLVVL
760 770 780 790 800
GAYYGKGKRT SWYGAFLLAC YNPKTEKYET VCNIGTGFSE AILESLHKTL
810 820 830 840 850
SEIVIDRPKP FYTHSTGNKD QPDVWFEPRY VWEVKTADLT LSPRYKAAAD
860 870 880 890 900
EVGGGGKGVS LRFPRFIKER DDKKPDEASS SRMIAEMYQR QESVGNNKGP

SADDDFEY
Length:908
Mass (Da):100,534
Last modified:July 1, 2008 - v1
Checksum:i4D10FD49EDB81E7B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS231615 Genomic DNA Translation: EDU40185.1
RefSeqiXP_001931080.1, XM_001931045.1

Genome annotation databases

EnsemblFungiiEDU40185; EDU40185; PTRG_00747
GeneIDi6338758

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS231615 Genomic DNA Translation: EDU40185.1
RefSeqiXP_001931080.1, XM_001931045.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi426418.XP_001931080.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiEDU40185; EDU40185; PTRG_00747
GeneIDi6338758

Phylogenomic databases

eggNOGiKOG0967 Eukaryota
COG1793 LUCA
InParanoidiB2VSW3
OrthoDBiEOG092C0FHN

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 2 hits
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB2VSW3_PYRTR
AccessioniPrimary (citable) accession number: B2VSW3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: October 25, 2017
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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