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Entry version 33 (07 Oct 2020)
Sequence version 1 (01 Jul 2008)
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Protein
Submitted name:

IS1 transposase orfA

Gene

SbBS512_E0015

Organism
Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
IS1 transposase orfAImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:SbBS512_E0015Imported, SbBS512_E0131Imported, SbBS512_E0467Imported, SbBS512_E0533Imported, SbBS512_E0547Imported, SbBS512_E0705Imported, SbBS512_E0928Imported, SbBS512_E1064Imported, SbBS512_E1672Imported, SbBS512_E1728Imported, SbBS512_E1892Imported, SbBS512_E1977Imported, SbBS512_E1999Imported, SbBS512_E2059Imported, SbBS512_E2357Imported, SbBS512_E2395Imported, SbBS512_E3050Imported, SbBS512_E3071Imported, SbBS512_E3253Imported, SbBS512_E3269Imported, SbBS512_E3445Imported, SbBS512_E3481Imported, SbBS512_E3510Imported, SbBS512_E3788Imported, SbBS512_E4206Imported, SbBS512_E4284Imported, SbBS512_E4539Imported, SbBS512_E4584Imported, SbBS512_E4648Imported, SbBS512_E4740Imported, SbBS512_E4801Imported, SbBS512_E4869Imported, SbBS512_E4895Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiShigella boydii serotype 18 (strain CDC 3083-94 / BS512)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri344609 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeShigella
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001030 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_185339_0_0_6

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B2TTC5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLAWLPFPSD VLPAPLLKAW CVTAKALPDI SAISALIAVK HGNYSSLTPP
60
LSPVRTRKSL IWP
Length:63
Mass (Da):6,821
Last modified:July 1, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i03A0AD392684EFF0
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP001063 Genomic DNA Translation: ACD06301.1
CP001063 Genomic DNA Translation: ACD06425.1
CP001063 Genomic DNA Translation: ACD06519.1
CP001063 Genomic DNA Translation: ACD06584.1
CP001063 Genomic DNA Translation: ACD06699.1
CP001063 Genomic DNA Translation: ACD06711.1
CP001063 Genomic DNA Translation: ACD06767.1
CP001063 Genomic DNA Translation: ACD07084.1
CP001063 Genomic DNA Translation: ACD07541.1
CP001063 Genomic DNA Translation: ACD07705.1
CP001063 Genomic DNA Translation: ACD07706.1
CP001063 Genomic DNA Translation: ACD07746.1
CP001063 Genomic DNA Translation: ACD07772.1
CP001063 Genomic DNA Translation: ACD07909.1
CP001063 Genomic DNA Translation: ACD07928.1
CP001063 Genomic DNA Translation: ACD08169.1
CP001063 Genomic DNA Translation: ACD08491.1
CP001063 Genomic DNA Translation: ACD08631.1
CP001063 Genomic DNA Translation: ACD08812.1
CP001063 Genomic DNA Translation: ACD08903.1
CP001063 Genomic DNA Translation: ACD08952.1
CP001063 Genomic DNA Translation: ACD09043.1
CP001063 Genomic DNA Translation: ACD09173.1
CP001063 Genomic DNA Translation: ACD09448.1
CP001063 Genomic DNA Translation: ACD09511.1
CP001063 Genomic DNA Translation: ACD09713.1
CP001063 Genomic DNA Translation: ACD09736.1
CP001063 Genomic DNA Translation: ACD09828.1
CP001063 Genomic DNA Translation: ACD10010.1
CP001063 Genomic DNA Translation: ACD10070.1
CP001063 Genomic DNA Translation: ACD10172.1
CP001063 Genomic DNA Translation: ACD10329.1
CP001063 Genomic DNA Translation: ACD10427.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ACD06301; ACD06301; SbBS512_E0015
ACD06425; ACD06425; SbBS512_E4539
ACD06519; ACD06519; SbBS512_E0467
ACD06584; ACD06584; SbBS512_E4648
ACD06699; ACD06699; SbBS512_E4740
ACD06711; ACD06711; SbBS512_E1728
ACD06767; ACD06767; SbBS512_E1672
ACD07084; ACD07084; SbBS512_E2357
ACD07541; ACD07541; SbBS512_E4869
ACD07705; ACD07705; SbBS512_E4801
ACD07706; ACD07706; SbBS512_E1892
ACD07746; ACD07746; SbBS512_E3510
ACD07772; ACD07772; SbBS512_E1977
ACD07909; ACD07909; SbBS512_E0533
ACD07928; ACD07928; SbBS512_E3481
ACD08169; ACD08169; SbBS512_E0131
ACD08491; ACD08491; SbBS512_E4584
ACD08631; ACD08631; SbBS512_E4284
ACD08812; ACD08812; SbBS512_E4206
ACD08903; ACD08903; SbBS512_E3253
ACD08952; ACD08952; SbBS512_E3071
ACD09043; ACD09043; SbBS512_E3445
ACD09173; ACD09173; SbBS512_E1064
ACD09448; ACD09448; SbBS512_E3269
ACD09511; ACD09511; SbBS512_E0928
ACD09713; ACD09713; SbBS512_E3788
ACD09736; ACD09736; SbBS512_E0705
ACD09828; ACD09828; SbBS512_E2059
ACD10010; ACD10010; SbBS512_E4895
ACD10070; ACD10070; SbBS512_E3050
ACD10172; ACD10172; SbBS512_E2395
ACD10329; ACD10329; SbBS512_E1999
ACD10427; ACD10427; SbBS512_E0547

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
sbc:SbBS512_E0015
sbc:SbBS512_E0131
sbc:SbBS512_E0467
sbc:SbBS512_E0533
sbc:SbBS512_E0547
sbc:SbBS512_E0705
sbc:SbBS512_E0928
sbc:SbBS512_E1064
sbc:SbBS512_E1672
sbc:SbBS512_E1728
sbc:SbBS512_E1892
sbc:SbBS512_E1977
sbc:SbBS512_E1999
sbc:SbBS512_E2059
sbc:SbBS512_E2357
sbc:SbBS512_E2395
sbc:SbBS512_E3050
sbc:SbBS512_E3071
sbc:SbBS512_E3253
sbc:SbBS512_E3269
sbc:SbBS512_E3445
sbc:SbBS512_E3481
sbc:SbBS512_E3510
sbc:SbBS512_E3788
sbc:SbBS512_E4206
sbc:SbBS512_E4284
sbc:SbBS512_E4539
sbc:SbBS512_E4584
sbc:SbBS512_E4648
sbc:SbBS512_E4740
sbc:SbBS512_E4801
sbc:SbBS512_E4869
sbc:SbBS512_E4895

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001063 Genomic DNA Translation: ACD06301.1
CP001063 Genomic DNA Translation: ACD06425.1
CP001063 Genomic DNA Translation: ACD06519.1
CP001063 Genomic DNA Translation: ACD06584.1
CP001063 Genomic DNA Translation: ACD06699.1
CP001063 Genomic DNA Translation: ACD06711.1
CP001063 Genomic DNA Translation: ACD06767.1
CP001063 Genomic DNA Translation: ACD07084.1
CP001063 Genomic DNA Translation: ACD07541.1
CP001063 Genomic DNA Translation: ACD07705.1
CP001063 Genomic DNA Translation: ACD07706.1
CP001063 Genomic DNA Translation: ACD07746.1
CP001063 Genomic DNA Translation: ACD07772.1
CP001063 Genomic DNA Translation: ACD07909.1
CP001063 Genomic DNA Translation: ACD07928.1
CP001063 Genomic DNA Translation: ACD08169.1
CP001063 Genomic DNA Translation: ACD08491.1
CP001063 Genomic DNA Translation: ACD08631.1
CP001063 Genomic DNA Translation: ACD08812.1
CP001063 Genomic DNA Translation: ACD08903.1
CP001063 Genomic DNA Translation: ACD08952.1
CP001063 Genomic DNA Translation: ACD09043.1
CP001063 Genomic DNA Translation: ACD09173.1
CP001063 Genomic DNA Translation: ACD09448.1
CP001063 Genomic DNA Translation: ACD09511.1
CP001063 Genomic DNA Translation: ACD09713.1
CP001063 Genomic DNA Translation: ACD09736.1
CP001063 Genomic DNA Translation: ACD09828.1
CP001063 Genomic DNA Translation: ACD10010.1
CP001063 Genomic DNA Translation: ACD10070.1
CP001063 Genomic DNA Translation: ACD10172.1
CP001063 Genomic DNA Translation: ACD10329.1
CP001063 Genomic DNA Translation: ACD10427.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsemblBacteriaiACD06301; ACD06301; SbBS512_E0015
ACD06425; ACD06425; SbBS512_E4539
ACD06519; ACD06519; SbBS512_E0467
ACD06584; ACD06584; SbBS512_E4648
ACD06699; ACD06699; SbBS512_E4740
ACD06711; ACD06711; SbBS512_E1728
ACD06767; ACD06767; SbBS512_E1672
ACD07084; ACD07084; SbBS512_E2357
ACD07541; ACD07541; SbBS512_E4869
ACD07705; ACD07705; SbBS512_E4801
ACD07706; ACD07706; SbBS512_E1892
ACD07746; ACD07746; SbBS512_E3510
ACD07772; ACD07772; SbBS512_E1977
ACD07909; ACD07909; SbBS512_E0533
ACD07928; ACD07928; SbBS512_E3481
ACD08169; ACD08169; SbBS512_E0131
ACD08491; ACD08491; SbBS512_E4584
ACD08631; ACD08631; SbBS512_E4284
ACD08812; ACD08812; SbBS512_E4206
ACD08903; ACD08903; SbBS512_E3253
ACD08952; ACD08952; SbBS512_E3071
ACD09043; ACD09043; SbBS512_E3445
ACD09173; ACD09173; SbBS512_E1064
ACD09448; ACD09448; SbBS512_E3269
ACD09511; ACD09511; SbBS512_E0928
ACD09713; ACD09713; SbBS512_E3788
ACD09736; ACD09736; SbBS512_E0705
ACD09828; ACD09828; SbBS512_E2059
ACD10010; ACD10010; SbBS512_E4895
ACD10070; ACD10070; SbBS512_E3050
ACD10172; ACD10172; SbBS512_E2395
ACD10329; ACD10329; SbBS512_E1999
ACD10427; ACD10427; SbBS512_E0547
KEGGisbc:SbBS512_E0015
sbc:SbBS512_E0131
sbc:SbBS512_E0467
sbc:SbBS512_E0533
sbc:SbBS512_E0547
sbc:SbBS512_E0705
sbc:SbBS512_E0928
sbc:SbBS512_E1064
sbc:SbBS512_E1672
sbc:SbBS512_E1728
sbc:SbBS512_E1892
sbc:SbBS512_E1977
sbc:SbBS512_E1999
sbc:SbBS512_E2059
sbc:SbBS512_E2357
sbc:SbBS512_E2395
sbc:SbBS512_E3050
sbc:SbBS512_E3071
sbc:SbBS512_E3253
sbc:SbBS512_E3269
sbc:SbBS512_E3445
sbc:SbBS512_E3481
sbc:SbBS512_E3510
sbc:SbBS512_E3788
sbc:SbBS512_E4206
sbc:SbBS512_E4284
sbc:SbBS512_E4539
sbc:SbBS512_E4584
sbc:SbBS512_E4648
sbc:SbBS512_E4740
sbc:SbBS512_E4801
sbc:SbBS512_E4869
sbc:SbBS512_E4895

Phylogenomic databases

HOGENOMiCLU_185339_0_0_6

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB2TTC5_SHIB3
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B2TTC5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: October 7, 2020
This is version 33 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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