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Protein

Protein transport protein Sec61 subunit beta

Gene

Sec61b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Necessary for protein translocation in the endoplasmic reticulum.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transport, TranslocationUniRule annotation, Transport

Enzyme and pathway databases

ReactomeiR-RNO-381038 XBP1(S) activates chaperone genes

Names & Taxonomyi

Protein namesi
Recommended name:
Protein transport protein Sec61 subunit betaUniRule annotation
Gene namesi
Name:Sec61bImported
Synonyms:Sec61b_predictedImported
ORF Names:rCG_60372Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1304997 Sec61b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei71 – 90HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Endoplasmic reticulumUniRule annotation, Membrane

PTM / Processingi

Proteomic databases

PRIDEiB2RZD1

Expressioni

Gene expression databases

BgeeiENSRNOG00000006345

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

IntActiB2RZD1, 1 interactor
MINTiB2RZD1
STRINGi10116.ENSRNOP00000008329

Family & Domainsi

Sequence similaritiesi

Belongs to the SEC61-beta family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3457 Eukaryota
ENOG4111UAR LUCA
GeneTreeiENSGT00390000003561
HOGENOMiHOG000211109
HOVERGENiHBG061281
KOiK09481
OMAiNSGGMWR
OrthoDBiEOG091G17J4
TreeFamiTF313144

Family and domain databases

InterProiView protein in InterPro
IPR030671 Sec61-beta/Sbh
IPR016482 SecG/Sec61-beta/Sbh
PANTHERiPTHR13509 PTHR13509, 1 hit
PfamiView protein in Pfam
PF03911 Sec61_beta, 1 hit
PIRSFiPIRSF006398 Sec61_beta_euk, 1 hit

Sequencei

Sequence statusi: Complete.

B2RZD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGPTPSATN VGSSGRSPSK AVAARAAGST VRQRKNASCG TRSAGRTTSA
60 70 80 90
GTGGMWRFYT EDSPGLKVGP VPVLVMSLLF IASVFMLHIW GKYTRS
Length:96
Mass (Da):9,988
Last modified:July 1, 2008 - v1
Checksum:i59C9F2791C649C49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07048121 Genomic DNA No translation available.
BC167110 mRNA Translation: AAI67110.1
CH474056 Genomic DNA Translation: EDL78204.1
RefSeqiNP_001100124.1, NM_001106654.2
UniGeneiRn.103030

Genome annotation databases

EnsembliENSRNOT00000008329; ENSRNOP00000008329; ENSRNOG00000006345
GeneIDi298068
KEGGirno:298068
UCSCiRGD:1304997 rat

Similar proteinsi

Entry informationi

Entry nameiB2RZD1_RAT
AccessioniPrimary (citable) accession number: B2RZD1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 2008
Last sequence update: July 1, 2008
Last modified: June 20, 2018
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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