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UniProtKB - B2RYP6 (B2RYP6_RAT)
Protein
Submitted name:
LUC7-like 2 (S. cerevisiae)
Gene
Luc7l2
Organism
Rattus norvegicus (Rat)
Status
Functioni
GO - Molecular functioni
- enzyme binding Source: RGD
- mRNA binding Source: GO_Central
GO - Biological processi
- mRNA splice site selection Source: GO_Central
Names & Taxonomyi
Protein namesi | Submitted name: LUC7-like 2 (S. cerevisiae)ImportedSubmitted name: LUC7-like 2 (S. cerevisiae) (Predicted)ImportedSubmitted name: LUC7-like 2 pre-mRNA-splicing factorImported |
Gene namesi | ORF Names:rCG_28248Imported |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 1308651, Luc7l2 |
Subcellular locationi
Nucleus
- nuclear speck Source: RGD
- U1 snRNP Source: GO_Central
- U2-type prespliceosome Source: GO_Central
Expressioni
Gene expression databases
Bgeei | ENSRNOG00000006001, Expressed in brain and 21 other tissues |
Interactioni
GO - Molecular functioni
- enzyme binding Source: RGD
Protein-protein interaction databases
IntActi | B2RYP6, 3 interactors |
STRINGi | 10116.ENSRNOP00000008557 |
Structurei
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 235 – 392 | DisorderedSequence analysisAdd BLAST | 158 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 112 – 146 | Sequence analysisAdd BLAST | 35 | |
Coiled coili | 149 – 172 | Sequence analysisAdd BLAST | 24 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 235 – 261 | Basic and acidic residuesSequence analysisAdd BLAST | 27 | |
Compositional biasi | 262 – 328 | Basic residuesSequence analysisAdd BLAST | 67 | |
Compositional biasi | 329 – 392 | Basic and acidic residuesSequence analysisAdd BLAST | 64 |
Sequence similaritiesi
Belongs to the Luc7 family.ARBA annotation
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
eggNOGi | KOG0796, Eukaryota |
GeneTreei | ENSGT00950000183213 |
HOGENOMi | CLU_030397_3_0_1 |
OMAi | DERERQW |
OrthoDBi | 1499212at2759 |
TreeFami | TF317607 |
Family and domain databases
InterProi | View protein in InterPro IPR004882, Luc7-rel |
PANTHERi | PTHR12375, PTHR12375, 1 hit |
Pfami | View protein in Pfam PF03194, LUC7, 1 hit |
i Sequence
Sequence statusi: Complete.
B2RYP6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSAQAQMRAM LDQLMGTSRD GDTTRQRIKF SDDRVCKSHL LNCCPHDVLS
60 70 80 90 100
GTRMDLGECL KVHDLALRAD YEIASKEQDF FFELDAMDHL QSFIADCDRR
110 120 130 140 150
TEVSKKRLAE TQEEISAEVA AKAERVHELN EEIGKLLAKV EQLGAEGNVE
160 170 180 190 200
ESQKVMDEVE KARAKKREAE EVYRNSMPAS SFQQQKLRVC EVCSAYLGLH
210 220 230 240 250
DNDRRLADHF GGKLHLGFIE IREKLEELKR VVAEKQEKRN QERLKRREER
260 270 280 290 300
EREEREKLRR SRSHSKNPKR SRSREHRRHR SRSMSRERKR RTRSKSREKR
310 320 330 340 350
HRHRSRSSSR SRSRSHQRSR HSSRDRSRER SKRRSSKERF RDQDLASRDR
360 370 380 390
DRSSRDRSPR DRDRKDKKRS YESANGRSED RRSSEEREAG EI
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AABR07060291 Genomic DNA No translation available. AABR07060292 Genomic DNA No translation available. AABR07060293 Genomic DNA No translation available. AABR07060294 Genomic DNA No translation available. BC166855 mRNA Translation: AAI66855.1 CH473959 Genomic DNA Translation: EDM15364.1 |
RefSeqi | NP_001101323.1, NM_001107853.1 |
Genome annotation databases
Ensembli | ENSRNOT00000008557; ENSRNOP00000008557; ENSRNOG00000006001 |
GeneIDi | 312251 |
KEGGi | rno:312251 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AABR07060291 Genomic DNA No translation available. AABR07060292 Genomic DNA No translation available. AABR07060293 Genomic DNA No translation available. AABR07060294 Genomic DNA No translation available. BC166855 mRNA Translation: AAI66855.1 CH473959 Genomic DNA Translation: EDM15364.1 |
RefSeqi | NP_001101323.1, NM_001107853.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
IntActi | B2RYP6, 3 interactors |
STRINGi | 10116.ENSRNOP00000008557 |
Genome annotation databases
Ensembli | ENSRNOT00000008557; ENSRNOP00000008557; ENSRNOG00000006001 |
GeneIDi | 312251 |
KEGGi | rno:312251 |
Organism-specific databases
CTDi | 51631 |
RGDi | 1308651, Luc7l2 |
Phylogenomic databases
eggNOGi | KOG0796, Eukaryota |
GeneTreei | ENSGT00950000183213 |
HOGENOMi | CLU_030397_3_0_1 |
OMAi | DERERQW |
OrthoDBi | 1499212at2759 |
TreeFami | TF317607 |
Gene expression databases
Bgeei | ENSRNOG00000006001, Expressed in brain and 21 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR004882, Luc7-rel |
PANTHERi | PTHR12375, PTHR12375, 1 hit |
Pfami | View protein in Pfam PF03194, LUC7, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | B2RYP6_RAT | |
Accessioni | B2RYP6Primary (citable) accession number: B2RYP6 Secondary accession number(s): F1LP75 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 1, 2008 |
Last sequence update: | July 1, 2008 | |
Last modified: | January 19, 2022 | |
This is version 101 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |