Luc7l2

Functionⁱ

GO - Molecular functionⁱ

mRNA binding Source: GO_Central

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

mRNA splice site selection Source: GO_Central

View the complete GO annotation on QuickGO ...

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: LUC7-like 2 (S. cerevisiae)Imported Submitted name: LUC7-like 2 (S. cerevisiae) (Predicted)Imported Submitted name: LUC7-like 2 pre-mRNA-splicing factorImported
Gene namesⁱ	Name:Luc7l2Imported Synonyms:Luc7l2_predictedImported ORF Names:rCG_28248Imported
Organismⁱ	Rattus norvegicus (Rat)Imported
Taxonomic identifierⁱ	10116 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
Proteomesⁱ	UP000002494 Componentⁱ: Chromosome 4

Organism-specific databases

Rat genome database More...RGDⁱ	1308651 Luc7l2

RGDⁱ

1308651 Luc7l2

Subcellular locationⁱ

GO - Cellular component

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSRNOG00000006001 Expressed in 9 organ(s), highest expression level in spleen

Bgeeⁱ

ENSRNOG00000006001 Expressed in 9 organ(s), highest expression level in spleen

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000008557

STRINGⁱ

10116.ENSRNOP00000008557

Family & Domainsⁱ

Coiled coil

Feature key	Position(s)	DescriptionActions	Length
Coiled coilⁱ	112 – 146	Sequence analysisAdd BLAST	35
Coiled coilⁱ	149 – 172	Sequence analysisAdd BLAST	24
Coiled coilⁱ	218 – 261	Sequence analysisAdd BLAST	44

Keywords - Domainⁱ

Coiled coilSequence analysis

Phylogenomic databases

eggNOGⁱ	KOG0796 Eukaryota COG5200 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00730000110670
HOGENOMⁱ	HOG000215956
HOVERGENⁱ	HBG062167
KEGG Orthology (KO) More...KOⁱ	K13212
OMAⁱ	DPKVCKS
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G0PSO
TreeFamⁱ	TF317607

Family and domain databases

InterProⁱ	View protein in InterPro IPR004882 Luc7-rel
PANTHERⁱ	PTHR12375 PTHR12375, 1 hit
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF03194 LUC7, 1 hit

Sequenceⁱ

Sequence statusⁱ: Complete.

B2RYP6-1 [UniParc]FASTA Add to basket

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        10         20         30         40         50
MSAQAQMRAM LDQLMGTSRD GDTTRQRIKF SDDRVCKSHL LNCCPHDVLS 
        60         70         80         90        100
GTRMDLGECL KVHDLALRAD YEIASKEQDF FFELDAMDHL QSFIADCDRR 
       110        120        130        140        150
TEVSKKRLAE TQEEISAEVA AKAERVHELN EEIGKLLAKV EQLGAEGNVE 
       160        170        180        190        200
ESQKVMDEVE KARAKKREAE EVYRNSMPAS SFQQQKLRVC EVCSAYLGLH 
       210        220        230        240        250
DNDRRLADHF GGKLHLGFIE IREKLEELKR VVAEKQEKRN QERLKRREER 
       260        270        280        290        300
EREEREKLRR SRSHSKNPKR SRSREHRRHR SRSMSRERKR RTRSKSREKR 
       310        320        330        340        350
HRHRSRSSSR SRSRSHQRSR HSSRDRSRER SKRRSSKERF RDQDLASRDR 
       360        370        380        390 
DRSSRDRSPR DRDRKDKKRS YESANGRSED RRSSEEREAG EI

Length:392

Mass (Da):46,583

Last modified:July 1, 2008 - v1

Checksum:ⁱ1A5202B1F537A7CC

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07060291 Genomic DNA No translation available. AABR07060292 Genomic DNA No translation available. AABR07060293 Genomic DNA No translation available. AABR07060294 Genomic DNA No translation available. BC166855 mRNA Translation: AAI66855.1 CH473959 Genomic DNA Translation: EDM15364.1
NCBI Reference Sequences More...RefSeqⁱ	NP_001101323.1, NM_001107853.1
UniGeneⁱ	Rn.18604

Genome annotation databases

Ensemblⁱ	ENSRNOT00000008557; ENSRNOP00000008557; ENSRNOG00000006001
GeneIDⁱ	312251
KEGGⁱ	rno:312251

Protein	Similar proteins		Species	Score	Length	Source
B2RYP6	Putative RNA-binding protein Luc7-like 2		MOUSE		392	UniRef100_Q7TNC4
Putative RNA-binding protein Luc7 1 (Fragment)		Daphnia magna		164

Protein	Similar proteins		Species	Score	Length	Source
B2RYP6	Putative RNA-binding protein Luc7-like 2		HUMAN		392	UniRef90_Q9Y383
Putative RNA-binding protein Luc7-like 2		MOUSE		392
Putative RNA-binding protein Luc7-like 2 isoform 1		CALJA		392
C7orf55-LUC7L2 readthrough		PANTR		392
LUC7 like 2, pre-mRNA splicing factor		SAIBB		392
+142

Protein	Similar proteins		Species	Score	Length	Source
B2RYP6	Putative RNA-binding protein Luc7-like 2		HUMAN		392	UniRef50_Q9Y383
Putative RNA-binding protein Luc7-like 2		MOUSE		392
Putative RNA-binding protein Luc7-like 2 isoform 1		CALJA		392
C7orf55-LUC7L2 readthrough		PANTR		392
LUC7 like 2, pre-mRNA splicing factor		SAIBB		392
+472

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07060291 Genomic DNA No translation available. AABR07060292 Genomic DNA No translation available. AABR07060293 Genomic DNA No translation available. AABR07060294 Genomic DNA No translation available. BC166855 mRNA Translation: AAI66855.1 CH473959 Genomic DNA Translation: EDM15364.1
RefSeqⁱ	NP_001101323.1, NM_001107853.1
UniGeneⁱ	Rn.18604

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000008557

STRINGⁱ

10116.ENSRNOP00000008557

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENSRNOT00000008557; ENSRNOP00000008557; ENSRNOG00000006001
GeneIDⁱ	312251
KEGGⁱ	rno:312251

Organism-specific databases

CTDⁱ	51631
RGDⁱ	1308651 Luc7l2

Phylogenomic databases

eggNOGⁱ	KOG0796 Eukaryota COG5200 LUCA
GeneTreeⁱ	ENSGT00730000110670
HOGENOMⁱ	HOG000215956
HOVERGENⁱ	HBG062167
KOⁱ	K13212
OMAⁱ	DPKVCKS
OrthoDBⁱ	EOG091G0PSO
TreeFamⁱ	TF317607

Gene expression databases

Bgeeⁱ	ENSRNOG00000006001 Expressed in 9 organ(s), highest expression level in spleen

Bgeeⁱ

ENSRNOG00000006001 Expressed in 9 organ(s), highest expression level in spleen

Family and domain databases

InterProⁱ	View protein in InterPro IPR004882 Luc7-rel
PANTHERⁱ	PTHR12375 PTHR12375, 1 hit
Pfamⁱ	View protein in Pfam PF03194 LUC7, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	B2RYP6_RAT
Accessionⁱ	B2RYP6Primary (citable) accession number: B2RYP6 Secondary accession number(s): F1LP75
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	July 1, 2008
	Last sequence update:	July 1, 2008
	Last modified:	October 10, 2018
	This is version 81 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

UniProtKB - B2RYP6 (B2RYP6_RAT)

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LUC7-like 2 (S. cerevisiae)

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Organism-specific databases

Subcellular locationⁱ

Nucleus

Expressionⁱ

Gene expression databases

Interactionⁱ

Protein-protein interaction databases

Family & Domainsⁱ

Coiled coil

Keywords - Domainⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProt is an ELIXIR core data resource

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - B2RYP6 (B2RYP6_RAT)

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LUC7-like 2 (S. cerevisiae)

Luc7l2

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<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Nucleus

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

UniProt is an ELIXIR core data resource

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

Expressionⁱ

Interactionⁱ

Family & Domainsⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ