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Protein

50S ribosomal protein L23

Gene

rplW

Organism
Mycobacterium marinum (strain ATCC BAA-535 / M)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L23UniRule annotation
Gene namesi
Name:rplWUniRule annotation
Ordered Locus Names:MMAR_1033
OrganismiMycobacterium marinum (strain ATCC BAA-535 / M)
Taxonomic identifieri216594 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000001190 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001445931 – 10050S ribosomal protein L23Add BLAST100

Proteomic databases

PRIDEiB2HSN3

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome.UniRule annotation

Protein-protein interaction databases

STRINGi216594.MMAR_1033

Structurei

3D structure databases

SMRiB2HSN3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL23 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KZR Bacteria
COG0089 LUCA
HOGENOMiHOG000231366
KOiK02892
OMAiTMNPPRR
OrthoDBiPOG091H00TK

Family and domain databases

Gene3Di3.30.70.330, 1 hit
HAMAPiMF_01369_B Ribosomal_L23_B, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR012678 Ribosomal_L23/L15e_core_dom_sf
IPR001014 Ribosomal_L23/L25_CS
IPR013025 Ribosomal_L25/23
PfamiView protein in Pfam
PF00276 Ribosomal_L23, 1 hit
SUPFAMiSSF54189 SSF54189, 1 hit
PROSITEiView protein in PROSITE
PS00050 RIBOSOMAL_L23, 1 hit

Sequencei

Sequence statusi: Complete.

B2HSN3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATIVDPRDI ILAPVISEKS YALLDDNVYT FVVHPDSNKT QIKIAIEKIF
60 70 80 90 100
AVKVASVNTA NRQGKRKRTR TGYGKRKSTK RAIVTLAPGS KPIDLFGAPA
Length:100
Mass (Da):10,953
Last modified:June 10, 2008 - v1
Checksum:i19E9149A776F5FB2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000854 Genomic DNA Translation: ACC39491.1
RefSeqiWP_012392940.1, NC_010612.1

Genome annotation databases

EnsemblBacteriaiACC39491; ACC39491; MMAR_1033
GeneIDi34340759
KEGGimmi:MMAR_1033

Similar proteinsi

Entry informationi

Entry nameiRL23_MYCMM
AccessioniPrimary (citable) accession number: B2HSN3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: June 10, 2008
Last modified: May 23, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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