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Protein
Submitted name:

Zbtb7c protein

Gene

Zbtb7c

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zbtb7c proteinImported
Submitted name:
Zinc finger and BTB domain-containing 7CImported
Gene namesi
Name:Zbtb7cImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 18

Organism-specific databases

RGDi1591841 Zbtb7c

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000047924 Expressed in 9 organ(s), highest expression level in colon

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000065115

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 101BTBInterPro annotationAdd BLAST68
Domaini364 – 391C2H2-typeInterPro annotationAdd BLAST28
Domaini392 – 419C2H2-typeInterPro annotationAdd BLAST28
Domaini420 – 447C2H2-typeInterPro annotationAdd BLAST28
Domaini448 – 483C2H2-typeInterPro annotationAdd BLAST36

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili154 – 174Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00930000150939
HOVERGENiHBG101042
KOiK10494
OMAiMCTICEV
OrthoDBiEOG091G03XR

Family and domain databases

InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF48371 SSF48371, 1 hit
SSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequencei

Sequence statusi: Complete.

B2GV04-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MANDIDELIG IPFPNHSSEV LCSLNEQRHA GLLCDVLLVV QEQEYRTHRS
60 70 80 90 100
VLAACSKYFK KLFTAGNLAS QPYVYEIDFV QPEALAAILE FAYTSTLTIT
110 120 130 140 150
ASNVKHILNA ARMLEIQCIV NVCLEIMEPG GNVGEEDDKE EEDDDEDDDD
160 170 180 190 200
EDDEEEEEEE EEEEEDDTED FADQENLPDP QDINCPQSPS KTDCLTEKDY
210 220 230 240 250
SDTPRDFPDS FQPESPGHLG VIRDFSIESL LRENLYPKAS IPDRRPSLSP
260 270 280 290 300
FAPEFFPHLW PGDFGAFAQL PEQPMDSGPL DLVIKDRKIK EEEKEELAPP
310 320 330 340 350
PPPPFSSDFF KDMFPDLPGG PLGPIKAEND YGAYLNFLSA THLGSLFPPW
360 370 380 390 400
PLVEERKLKP KASQQCPICH KVIMGAGKLP RHMRTHTGEK PYMCSICEVR
410 420 430 440 450
FTRQDKLKIH MRKHTGERPY LCIHCNAKFV HNYDLKNHMR IHTGVRPYQC
460 470 480 490 500
EFCYKSFTRS DHLHRHIKRQ SCRMARPRRG RKPAAWRAAS LLFGPGGPSA
510 520 530 540 550
DKAAFVMPPA LGDVGGHLGG TAVCLPGPSP AKHFLASPKG TLSLQELERQ
560 570 580 590 600
FEETQMKLFG RAQLEAERNA GGLLALALAE NVAATRPYFP LPDPWAAGLA
610
GLPGLTGLNH VASMSEANN
Length:619
Mass (Da):69,227
Last modified:June 10, 2008 - v1
Checksum:i6FAACF35E583F4AC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07032563 Genomic DNA No translation available.
AABR07032564 Genomic DNA No translation available.
AABR07032565 Genomic DNA No translation available.
AABR07032566 Genomic DNA No translation available.
AABR07032567 Genomic DNA No translation available.
AABR07032568 Genomic DNA No translation available.
AABR07032569 Genomic DNA No translation available.
AABR07032570 Genomic DNA No translation available.
AABR07032571 Genomic DNA No translation available.
AABR07032572 Genomic DNA No translation available.
BC166476 mRNA Translation: AAI66476.1
RefSeqiNP_001120847.1, NM_001127375.1
UniGeneiRn.217913

Genome annotation databases

EnsembliENSRNOT00000072519; ENSRNOP00000065115; ENSRNOG00000047924
GeneIDi679155
KEGGirno:679155

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07032563 Genomic DNA No translation available.
AABR07032564 Genomic DNA No translation available.
AABR07032565 Genomic DNA No translation available.
AABR07032566 Genomic DNA No translation available.
AABR07032567 Genomic DNA No translation available.
AABR07032568 Genomic DNA No translation available.
AABR07032569 Genomic DNA No translation available.
AABR07032570 Genomic DNA No translation available.
AABR07032571 Genomic DNA No translation available.
AABR07032572 Genomic DNA No translation available.
BC166476 mRNA Translation: AAI66476.1
RefSeqiNP_001120847.1, NM_001127375.1
UniGeneiRn.217913

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000065115

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000072519; ENSRNOP00000065115; ENSRNOG00000047924
GeneIDi679155
KEGGirno:679155

Organism-specific databases

CTDi201501
RGDi1591841 Zbtb7c

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00930000150939
HOVERGENiHBG101042
KOiK10494
OMAiMCTICEV
OrthoDBiEOG091G03XR

Gene expression databases

BgeeiENSRNOG00000047924 Expressed in 9 organ(s), highest expression level in colon

Family and domain databases

InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF48371 SSF48371, 1 hit
SSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiB2GV04_RAT
AccessioniPrimary (citable) accession number: B2GV04
Entry historyiIntegrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: November 7, 2018
This is version 88 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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