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Protein
Submitted name:

Klf16 protein

Gene

Klf16

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Klf16 proteinImported
Submitted name:
Kruppel-like factor 16Imported
Submitted name:
RCG29340Imported
Gene namesi
Name:Klf16Imported
ORF Names:rCG_29340Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1305966 Klf16

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000033694 Expressed in 10 organ(s), highest expression level in brain

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000051080

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini126 – 155C2H2-typeInterPro annotationAdd BLAST30
Domaini156 – 185C2H2-typeInterPro annotationAdd BLAST30
Domaini186 – 213C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
HOGENOMiHOG000152391
HOVERGENiHBG050746
KOiK09208
OMAiPMSAYSE
OrthoDBiEOG091G1BN0
TreeFamiTF315506

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequencei

Sequence statusi: Complete.

B2GUY9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSAAVACVDY FAADVLMAIS SGAVVHRGRP GPEGAGPAAG LDVRATRREA
60 70 80 90 100
TPPGTPGAPP PPATAPGSGG ATAAPHLLAA SILADLRGGP GVATAANTAG
110 120 130 140 150
GTSPVSSSSA ASSPSSGRAP GAAKSHRCPF PGCAKAYYKS SHLKSHLRTH
160 170 180 190 200
TGERPFACDW PGCDKKFARS DELARHHRTH TGEKRFPCPL CTKRFTRSDH
210 220 230 240 250
LTKHARRHPG FRPELLRRPG ARSASPSDSL PCSLAGSPTP SPVPSPAPAG

L
Length:251
Mass (Da):25,559
Last modified:June 10, 2008 - v1
Checksum:iB97801DE738DD2BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07073279 Genomic DNA No translation available.
BC166458 mRNA Translation: AAI66458.1
CH474029 Genomic DNA Translation: EDL89265.1
RefSeqiNP_001121076.1, NM_001127604.1
UniGeneiRn.18431

Genome annotation databases

EnsembliENSRNOT00000045421; ENSRNOP00000051080; ENSRNOG00000033694
GeneIDi690820
KEGGirno:690820
UCSCiRGD:1305966 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07073279 Genomic DNA No translation available.
BC166458 mRNA Translation: AAI66458.1
CH474029 Genomic DNA Translation: EDL89265.1
RefSeqiNP_001121076.1, NM_001127604.1
UniGeneiRn.18431

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000051080

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000045421; ENSRNOP00000051080; ENSRNOG00000033694
GeneIDi690820
KEGGirno:690820
UCSCiRGD:1305966 rat

Organism-specific databases

CTDi83855
RGDi1305966 Klf16

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
HOGENOMiHOG000152391
HOVERGENiHBG050746
KOiK09208
OMAiPMSAYSE
OrthoDBiEOG091G1BN0
TreeFamiTF315506

Gene expression databases

BgeeiENSRNOG00000033694 Expressed in 10 organ(s), highest expression level in brain

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiB2GUY9_RAT
AccessioniPrimary (citable) accession number: B2GUY9
Secondary accession number(s): F1LRP4
Entry historyiIntegrated into UniProtKB/TrEMBL: June 10, 2008
Last sequence update: June 10, 2008
Last modified: November 7, 2018
This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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