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UniProtKB - B2GUY2 (TFR2_RAT)

Entry version 91 (23 Feb 2022)
Sequence version 1 (10 Jun 2008)
Previous versions | rss
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Protein

Transferrin receptor protein 2

Gene

Tfr2

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Mediates cellular uptake of transferrin-bound iron in a non-iron dependent manner. May be involved in iron metabolism, hepatocyte function and erythrocyte differentiation (By similarity).

By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionReceptor

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-RNO-917977, Transferrin endocytosis and recycling

Protein family/group databases

MEROPS protease database

More...MEROPSi		M28.973

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Transferrin receptor protein 2
Short name:
TfR2
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Tfr2
Synonyms:Trfr2
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 12
  • UP000234681 Componenti: Chromosome 12

Organism-specific databases

Rat genome database

More...RGDi		1310152, Tfr2

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 81CytoplasmicSequence analysisAdd BLAST81
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei82 – 102Helical; Signal-anchor for type II membrane proteinSequence analysisAdd BLAST21
Topological domaini103 – 798ExtracellularSequence analysisAdd BLAST696

Keywords - Cellular componenti

Cell membrane, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003482331 – 798Transferrin receptor protein 2Add BLAST798

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi106InterchainSequence analysis
Disulfide bondi109InterchainSequence analysis
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi235N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi334N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi535N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		B2GUY2

PeptideAtlas

More...PeptideAtlasi		B2GUY2

PRoteomics IDEntifications database

More...PRIDEi		B2GUY2

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...GlyGeni		B2GUY2, 3 sites

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSRNOG00000001407, Expressed in liver and 21 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		B2GUY2, RN

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer.

By similarity

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

Protein interaction database and analysis system

More...IntActi		B2GUY2, 1 interactor

STRING: functional protein association networks

More...STRINGi		10116.ENSRNOP00000001905

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		B2GUY2

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni25 – 45DisorderedSequence analysisAdd BLAST21

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological significance.<p><a href='/help/motif' target='_top'>More...</a></p>Motifi23 – 26Endocytosis signalSequence analysis4

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the peptidase M28 family. M28B subfamily.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG2195, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT01030000234598

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_005688_5_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		B2GUY2

Identification of Orthologs from Complete Genome Data

More...OMAi		FSQGPHK

Database of Orthologous Groups

More...OrthoDBi		804230at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		B2GUY2

TreeFam database of animal gene trees

More...TreeFami		TF312981

Family and domain databases

Conserved Domains Database

More...CDDi		cd02128, PA_TfR, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.20.930.40, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR003137, PA_domain
IPR007484, Peptidase_M28
IPR039373, Peptidase_M28B
IPR036757, TFR-like_dimer_dom_sf
IPR037324, TfR1/2_PA

The PANTHER Classification System

More...PANTHERi		PTHR10404, PTHR10404, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF02225, PA, 1 hit
PF04389, Peptidase_M28, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF47672, SSF47672, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B2GUY2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEQRWGLLRK VQQWSPRPSQ TIYRRVEGPQ LENLEEEDRE EGEELPAQFC 
        60         70         80         90        100
PMELKGPERL GSCPGRSIPI PWAAAGRKAA PYLVLTTLLI FTGAFLLGYV 
       110        120        130        140        150
AFRGSCQACG DSVLVVGEDV NSEDSSRGTL YWSDLQDMFL RFLGEGRMED 
       160        170        180        190        200
TIRLTSLRER VAGSARMATL VQDILDKLSR QKLDHVWTDT HYVGLQFPDP 
       210        220        230        240        250
AHPNTLHWVG ADGSVQEQLP LEDPEVYCPY SATGNATGKL VYAHYGRRED 
       260        270        280        290        300
LQDLKAKDVE LAGSLLLVRA GITSFAQKVA IAQDFGAHGV LIYPDPADFS 
       310        320        330        340        350
QDPHKPGLSS DRAVYGHVHL GTGDPYTPGF PSFNQTQFPP VESSGLPNIP 
       360        370        380        390        400
AQPISADVAD RLLRKLTGPV APQEWKGRLS DSPYRLGPGP GLRLVVNNHR 
       410        420        430        440        450
TSTPISNIFA CIEGFAEPDH YVVIGAQRDA WGPGAAKSAV GTAILLELVR 
       460        470        480        490        500
TFSSMVSSGF RPRRSLLFIS WDGGDFGSVG ATEWLEGYLS VLHLKAVVYV 
       510        520        530        540        550
SLDNSVLGDG KFHAKTSPLL VSLIENILKQ VDSPNHSGQT LYDQVAFTHP 
       560        570        580        590        600
SWDAEVIQPL PMDSSAYSFT AFAGVPAVEF SFMEDDRVYP FLHTKEDTYE 
       610        620        630        640        650
NLHKMLRGRL PAVVLAVAQL AGQLLIRLSH DHLLPLDFGR YGDVVLRHIG 
       660        670        680        690        700
NLNEFSGDLK ARGLTLQWVY SARGDYIRAA EKLRKEIYSS EQSDERLMRM 
       710        720        730        740        750
YNVRIMRVEF YFLSQYVSPA DSPFRHIFLG QGDHTLGALV EHLRMLRSDG 
       760        770        780        790 
SGAASSGLSP GLGFQESRFR RQLALLTWTL QGAANALSGD VWNIDNNF
Length:798
Mass (Da):88,328
Last modified:June 10, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2EFF8F3D965D85B0
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
CH473973 Genomic DNA Translation: EDM13257.1
CH473973 Genomic DNA Translation: EDM13258.1
CH473973 Genomic DNA Translation: EDM13259.1
BC166451 mRNA Translation: AAI66451.1

NCBI Reference Sequences

More...RefSeqi		NP_001099386.1, NM_001105916.1
XP_006249179.1, XM_006249117.2
XP_006249180.1, XM_006249118.1
XP_008767347.1, XM_008769125.2
XP_008767348.1, XM_008769126.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSRNOT00000001905; ENSRNOP00000001905; ENSRNOG00000001407
ENSRNOT00000082895; ENSRNOP00000072585; ENSRNOG00000001407

Database of genes from NCBI RefSeq genomes

More...GeneIDi		288562

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		rno:288562

UCSC genome browser

More...UCSCi		RGD:1310152, rat

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH473973 Genomic DNA Translation: EDM13257.1
CH473973 Genomic DNA Translation: EDM13258.1
CH473973 Genomic DNA Translation: EDM13259.1
BC166451 mRNA Translation: AAI66451.1
RefSeqiNP_001099386.1, NM_001105916.1
XP_006249179.1, XM_006249117.2
XP_006249180.1, XM_006249118.1
XP_008767347.1, XM_008769125.2
XP_008767348.1, XM_008769126.1

3D structure databases

SMRiB2GUY2
ModBaseiSearch...

Protein-protein interaction databases

IntActiB2GUY2, 1 interactor
STRINGi10116.ENSRNOP00000001905

Protein family/group databases

MEROPSiM28.973

PTM databases

GlyGeniB2GUY2, 3 sites

Proteomic databases

PaxDbiB2GUY2
PeptideAtlasiB2GUY2
PRIDEiB2GUY2

Genome annotation databases

EnsembliENSRNOT00000001905; ENSRNOP00000001905; ENSRNOG00000001407
ENSRNOT00000082895; ENSRNOP00000072585; ENSRNOG00000001407
GeneIDi288562
KEGGirno:288562
UCSCiRGD:1310152, rat

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		7036
RGDi1310152, Tfr2

Phylogenomic databases

eggNOGiKOG2195, Eukaryota
GeneTreeiENSGT01030000234598
HOGENOMiCLU_005688_5_0_1
InParanoidiB2GUY2
OMAiFSQGPHK
OrthoDBi804230at2759
PhylomeDBiB2GUY2
TreeFamiTF312981

Enzyme and pathway databases

ReactomeiR-RNO-917977, Transferrin endocytosis and recycling

Miscellaneous databases

Protein Ontology

More...PROi		PR:B2GUY2

Gene expression databases

BgeeiENSRNOG00000001407, Expressed in liver and 21 other tissues
GenevisibleiB2GUY2, RN

Family and domain databases

CDDicd02128, PA_TfR, 1 hit
Gene3Di1.20.930.40, 1 hit
InterProiView protein in InterPro
IPR003137, PA_domain
IPR007484, Peptidase_M28
IPR039373, Peptidase_M28B
IPR036757, TFR-like_dimer_dom_sf
IPR037324, TfR1/2_PA
PANTHERiPTHR10404, PTHR10404, 1 hit
PfamiView protein in Pfam
PF02225, PA, 1 hit
PF04389, Peptidase_M28, 1 hit
SUPFAMiSSF47672, SSF47672, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTFR2_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B2GUY2
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: June 10, 2008
Last modified: February 23, 2022
This is version 91 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
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