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Protein

PKHD-type hydroxylase SYNPCC7002_A2658

Gene

SYNPCC7002_A2658

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

Protein has several cofactor binding sites:
  • Fe2+UniRule annotationNote: Binds 1 Fe2+ ion per subunit.UniRule annotation
  • L-ascorbateUniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi96IronUniRule annotation1
Metal bindingi98IronUniRule annotation1
Metal bindingi153IronUniRule annotation1
Binding sitei1632-oxoglutarateUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionDioxygenase, Oxidoreductase
LigandIron, Metal-binding, Vitamin C

Names & Taxonomyi

Protein namesi
Recommended name:
PKHD-type hydroxylase SYNPCC7002_A2658UniRule annotation (EC:1.14.11.-UniRule annotation)
Gene namesi
Ordered Locus Names:SYNPCC7002_A2658
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesSynechococcaceaeSynechococcus
Proteomesi
  • UP000001688 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003465271 – 219PKHD-type hydroxylase SYNPCC7002_A2658Add BLAST219

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A2658

Structurei

3D structure databases

ProteinModelPortaliB1XLW1
SMRiB1XLW1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini78 – 172Fe2OG dioxygenaseUniRule annotationAdd BLAST95

Phylogenomic databases

eggNOGiENOG4107E2E Bacteria
COG3128 LUCA
HOGENOMiHOG000236239
KOiK07336
OMAiGTYHNLL
OrthoDBiPOG091H0LGZ

Family and domain databases

HAMAPiMF_00657 Hydroxyl_YbiX, 1 hit
InterProiView protein in InterPro
IPR005123 Oxoglu/Fe-dep_dioxygenase
IPR023550 PKHD_hydroxylase
IPR006620 Pro_4_hyd_alph
PANTHERiPTHR41536 PTHR41536, 1 hit
PfamiView protein in Pfam
PF13640 2OG-FeII_Oxy_3, 1 hit
SMARTiView protein in SMART
SM00702 P4Hc, 1 hit
PROSITEiView protein in PROSITE
PS51471 FE2OG_OXY, 1 hit

Sequencei

Sequence statusi: Complete.

B1XLW1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFFKIPQVLT PEALEKITTT LTEAEFVDGK LTAGWYAKLV KENQQLAKAT
60 70 80 90 100
PTAQALEEQV RQALQSNALF QTAIRPKTVH TLLFSRYGPG MAYGRHTDNA
110 120 130 140 150
LMNGMRSDVS FTLFLNEPSD YEGGELVIEG ADSEQSYKLP AGTAIAYPST
160 170 180 190 200
SLHRVNVVTK GTRLVAVGWV QSWIRDAQKR EIVFDLDVSR RSLFAQSGKT
210
TEFDLLSKSV ANLLRLWSE
Length:219
Mass (Da):24,404
Last modified:May 20, 2008 - v1
Checksum:i183649B7A073E0A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA Translation: ACB00635.1
RefSeqiWP_012308253.1, NC_010475.1

Genome annotation databases

EnsemblBacteriaiACB00635; ACB00635; SYNPCC7002_A2658
KEGGisyp:SYNPCC7002_A2658

Similar proteinsi

Entry informationi

Entry nameiY2658_SYNP2
AccessioniPrimary (citable) accession number: B1XLW1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: May 20, 2008
Last modified: July 18, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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