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Protein
Submitted name:

Ccdc123 protein

Gene

Cep89

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-5620912 Anchoring of the basal body to the plasma membrane

Names & Taxonomyi

Protein namesi
Submitted name:
Ccdc123 proteinImported
Submitted name:
Centrosomal protein 89Imported
Gene namesi
Name:Cep89Imported
Synonyms:Ccdc123Imported, RGD1311730Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1311730 Cep89

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000012140 Expressed in 9 organ(s), highest expression level in testis

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000029909

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili253 – 287Sequence analysisAdd BLAST35
Coiled coili369 – 389Sequence analysisAdd BLAST21
Coiled coili461 – 502Sequence analysisAdd BLAST42
Coiled coili516 – 554Sequence analysisAdd BLAST39
Coiled coili562 – 582Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IGSG Eukaryota
ENOG410ZNEI LUCA
GeneTreeiENSGT00390000018876
HOGENOMiHOG000111383
HOVERGENiHBG075238
KOiK16543

Family and domain databases

InterProiView protein in InterPro
IPR033545 CEP89
PANTHERiPTHR36170 PTHR36170, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

B1WBZ3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLLSFRRNRR SQFNHIIHGF LPAASIAPKP AVPRTPPPRS PNPSPERPRS
60 70 80 90 100
ALAAAILATT LTGQTVAIPQ PRQRSRSESD ASQVEKDSFI EPYATTSELR
110 120 130 140 150
LRQSWQNEPK RTSLPSFETL GYREDEDAET QVSSSCRESE STTWKDVGDG
160 170 180 190 200
RGAAYAVPLR RQVSSSQKLV RKGDASEQDW LSDSSSSSST PQDTQQKDVK
210 220 230 240 250
PSVPNLEDEK VPLCKKTPPS PDVAGRIHQR YTKITKEKFD ELKEETVHLY
260 270 280 290 300
TANQALSLEL STLRQAMKDL QLKLKIVEKD NRKLKETEKA SSQEVVTPEL
310 320 330 340 350
LCLRKQSQDL VDENEGLKMI IHRLNVELSR YQTKFRPLSE EESSYIEGLP
360 370 380 390 400
SKGPTPPWLV DIKYLSPLLL AYEDRMKEKD KLSTALEEEM KTFRLRVQEV
410 420 430 440 450
VRENEGLHQE LTKRSPVTIE EWRQLQTQAE LVLDENKLLI EQLEIQQTKA
460 470 480 490 500
KDTQQAHLRD VSKLTKQLVL LEAKTQSQEK QLMESKEQLE SLEARCRELK
510 520 530 540 550
TQLDSKIAPD VHTSIVNELK SQLQKEEEKD SAEMEELMGK LTALQVQKKS
560 570 580 590 600
LLLEKSSWAT SNRALEAELE LTRKANRRYQ KKIGVLRKQV EKAMGKEMSA
610 620 630
HQYLANLVGL AENVTKERDS LKYLMLEKRT ASKNLARF
Length:638
Mass (Da):72,885
Last modified:May 20, 2008 - v1
Checksum:i968C6B3484735539
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0G2JZG8A0A0G2JZG8_RAT
Centrosomal protein 89
Cep89
790Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07002993 Genomic DNA No translation available.
BC161945 mRNA Translation: AAI61945.1
RefSeqiNP_001121071.1, NM_001127599.1
XP_006228945.1, XM_006228883.3
UniGeneiRn.161833

Genome annotation databases

EnsembliENSRNOT00000031236; ENSRNOP00000029909; ENSRNOG00000012140
GeneIDi292811
KEGGirno:292811

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07002993 Genomic DNA No translation available.
BC161945 mRNA Translation: AAI61945.1
RefSeqiNP_001121071.1, NM_001127599.1
XP_006228945.1, XM_006228883.3
UniGeneiRn.161833

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000029909

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000031236; ENSRNOP00000029909; ENSRNOG00000012140
GeneIDi292811
KEGGirno:292811

Organism-specific databases

CTDi84902
RGDi1311730 Cep89

Phylogenomic databases

eggNOGiENOG410IGSG Eukaryota
ENOG410ZNEI LUCA
GeneTreeiENSGT00390000018876
HOGENOMiHOG000111383
HOVERGENiHBG075238
KOiK16543

Enzyme and pathway databases

ReactomeiR-RNO-5620912 Anchoring of the basal body to the plasma membrane

Gene expression databases

BgeeiENSRNOG00000012140 Expressed in 9 organ(s), highest expression level in testis

Family and domain databases

InterProiView protein in InterPro
IPR033545 CEP89
PANTHERiPTHR36170 PTHR36170, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB1WBZ3_RAT
AccessioniPrimary (citable) accession number: B1WBZ3
Secondary accession number(s): E9PU67
Entry historyiIntegrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: September 12, 2018
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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