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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_Y53H1A.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_Y53H1A.2Imported, Y53H1A.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiY53H1A.2b ; CE42483 ; WBGene00013178

PTM / Processingi

Proteomic databases

PaxDbiB1V8K4

Expressioni

Gene expression databases

BgeeiWBGene00013178 Expressed in 3 organ(s), highest expression level in adult organism

Interactioni

Protein-protein interaction databases

STRINGi6239.Y53H1A.2b

Structurei

3D structure databases

ProteinModelPortaliB1V8K4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini143 – 170C2H2-typeInterPro annotationAdd BLAST28
Domaini171 – 200C2H2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1561 Eukaryota
COG5224 LUCA
InParanoidiB1V8K4
OMAiSEHPEEI
OrthoDBiEOG091G117P

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

B1V8K4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATMTERKQD FSCPNYMLFG DDFNLQSGIE DISCSSNYTS DEDGPKVLTT
60 70 80 90 100
MRNMFAEQKT DEYELVYDNN SQNVPQNCSP KNQYSPPQSV QQAHYSNLSH
110 120 130 140 150
FHPRNPEFSQ EIVENRVISP KSEHPEEIED HEDDEDGQSE MKHNCPECPK
160 170 180 190 200
KYTSERRLKH HIVVHRNPDA YKCQKCGYCY QSPDSLRRHW KKTPNCDEFP
210
PKINVKTEIL DPDS
Length:214
Mass (Da):24,983
Last modified:May 20, 2008 - v1
Checksum:i8947EBD9282E36BD
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
B1V8K3B1V8K3_CAEEL
Uncharacterized protein
CELE_Y53H1A.2, Y53H1A.2
211Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CAQ35075.1
RefSeqiNP_001122547.1, NM_001129075.2
UniGeneiCel.37033

Genome annotation databases

EnsemblMetazoaiY53H1A.2b; Y53H1A.2b; WBGene00013178
GeneIDi173016
KEGGicel:CELE_Y53H1A.2

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CAQ35075.1
RefSeqiNP_001122547.1, NM_001129075.2
UniGeneiCel.37033

3D structure databases

ProteinModelPortaliB1V8K4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.Y53H1A.2b

Proteomic databases

PaxDbiB1V8K4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiY53H1A.2b; Y53H1A.2b; WBGene00013178
GeneIDi173016
KEGGicel:CELE_Y53H1A.2

Organism-specific databases

CTDi173016
WormBaseiY53H1A.2b ; CE42483 ; WBGene00013178

Phylogenomic databases

eggNOGiKOG1561 Eukaryota
COG5224 LUCA
InParanoidiB1V8K4
OMAiSEHPEEI
OrthoDBiEOG091G117P

Gene expression databases

BgeeiWBGene00013178 Expressed in 3 organ(s), highest expression level in adult organism

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiB1V8K4_CAEEL
AccessioniPrimary (citable) accession number: B1V8K4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 7, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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