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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_Y53H1A.2

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_Y53H1A.2Imported, Y53H1A.2Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiY53H1A.2a ; CE42547 ; WBGene00013178

PTM / Processingi

Proteomic databases

EPDiB1V8K3
PeptideAtlasiB1V8K3

Expressioni

Gene expression databases

BgeeiWBGene00013178 Expressed in 3 organ(s), highest expression level in adult organism

Structurei

3D structure databases

ProteinModelPortaliB1V8K3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini140 – 167C2H2-typeInterPro annotationAdd BLAST28
Domaini168 – 197C2H2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1561 Eukaryota
COG5224 LUCA
PhylomeDBiB1V8K3

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

B1V8K3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTERKQDFSC PNYMLFGDDF NLQSGIEDIS CSSNYTSDED GPKVLTTMRN
60 70 80 90 100
MFAEQKTDEY ELVYDNNSQN VPQNCSPKNQ YSPPQSVQQA HYSNLSHFHP
110 120 130 140 150
RNPEFSQEIV ENRVISPKSE HPEEIEDHED DEDGQSEMKH NCPECPKKYT
160 170 180 190 200
SERRLKHHIV VHRNPDAYKC QKCGYCYQSP DSLRRHWKKT PNCDEFPPKI
210
NVKTEILDPD S
Length:211
Mass (Da):24,680
Last modified:May 20, 2008 - v1
Checksum:iBFA5D0B51117761C
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
B1V8K4B1V8K4_CAEEL
Uncharacterized protein
CELE_Y53H1A.2, Y53H1A.2
214Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CAQ35074.1
RefSeqiNP_001122546.1, NM_001129074.1
UniGeneiCel.37033

Genome annotation databases

EnsemblMetazoaiY53H1A.2a; Y53H1A.2a; WBGene00013178
GeneIDi173016

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CAQ35074.1
RefSeqiNP_001122546.1, NM_001129074.1
UniGeneiCel.37033

3D structure databases

ProteinModelPortaliB1V8K3
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

EPDiB1V8K3
PeptideAtlasiB1V8K3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiY53H1A.2a; Y53H1A.2a; WBGene00013178
GeneIDi173016

Organism-specific databases

CTDi173016
WormBaseiY53H1A.2a ; CE42547 ; WBGene00013178

Phylogenomic databases

eggNOGiKOG1561 Eukaryota
COG5224 LUCA
PhylomeDBiB1V8K3

Gene expression databases

BgeeiWBGene00013178 Expressed in 3 organ(s), highest expression level in adult organism

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiB1V8K3_CAEEL
AccessioniPrimary (citable) accession number: B1V8K3
Entry historyiIntegrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 7, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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