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Protein
Submitted name:

Uncharacterized protein

Gene

CELE_F54F7.10

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-CEL-1234176 Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha
R-CEL-674695 RNA Polymerase II Pre-transcription Events
R-CEL-6796648 TP53 Regulates Transcription of DNA Repair Genes
R-CEL-8951664 Neddylation
R-CEL-983168 Antigen processing: Ubiquitination & Proteasome degradation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CELE_F54F7.10Imported, F54F7.10Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiF54F7.10 ; CE42211 ; WBGene00077680

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiB1Q256

Expressioni

Gene expression databases

BgeeiWBGene00077680 Expressed in 2 organ(s), highest expression level in multi-cellular organism

Interactioni

Protein-protein interaction databases

STRINGi6239.F54F7.10

Structurei

3D structure databases

ProteinModelPortaliB1Q256
SMRiB1Q256
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini46 – 107Skp1_POZInterPro annotationAdd BLAST62

Sequence similaritiesi

Belongs to the SKP1 family.SAAS annotation

Phylogenomic databases

eggNOGiKOG3473 Eukaryota
ENOG41123WR LUCA
GeneTreeiENSGT00390000011717
HOGENOMiHOG000020620
InParanoidiB1Q256
OMAiSCERETS
OrthoDBiEOG091G0W26
PhylomeDBiB1Q256

Family and domain databases

InterProiView protein in InterPro
IPR039948 ELC1
IPR001232 SKP1-like
IPR011333 SKP1/BTB/POZ_sf
IPR016073 Skp1_comp_POZ
PANTHERiPTHR20648 PTHR20648, 1 hit
PfamiView protein in Pfam
PF03931 Skp1_POZ, 1 hit
SMARTiView protein in SMART
SM00512 Skp1, 1 hit
SUPFAMiSSF54695 SSF54695, 1 hit

Sequencei

Sequence statusi: Complete.

B1Q256-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSENISCERE TSEKFTKLKL VEEENEDDDE TPKGSPVTVM VKHREYVKLV
60 70 80 90 100
SNDNHEYYIQ RDLAETSRII RDMLHCPGRS TSNCTVYLHM VNSRTLQKVC
110 120 130
HYLAYQKQYL RRNGEIESFN IEPAGAMDLL LVAGFLEL
Length:138
Mass (Da):16,047
Last modified:April 29, 2008 - v1
Checksum:iD1B0161FAC191C52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CAQ16142.1
RefSeqiNP_001123148.1, NM_001129676.1
UniGeneiCel.37154

Genome annotation databases

EnsemblMetazoaiF54F7.10; F54F7.10; WBGene00077680
GeneIDi6418855
KEGGicel:CELE_F54F7.10
UCSCiF54F7.10 c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA Translation: CAQ16142.1
RefSeqiNP_001123148.1, NM_001129676.1
UniGeneiCel.37154

3D structure databases

ProteinModelPortaliB1Q256
SMRiB1Q256
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F54F7.10

Proteomic databases

PaxDbiB1Q256

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF54F7.10; F54F7.10; WBGene00077680
GeneIDi6418855
KEGGicel:CELE_F54F7.10
UCSCiF54F7.10 c. elegans

Organism-specific databases

CTDi6418855
WormBaseiF54F7.10 ; CE42211 ; WBGene00077680

Phylogenomic databases

eggNOGiKOG3473 Eukaryota
ENOG41123WR LUCA
GeneTreeiENSGT00390000011717
HOGENOMiHOG000020620
InParanoidiB1Q256
OMAiSCERETS
OrthoDBiEOG091G0W26
PhylomeDBiB1Q256

Enzyme and pathway databases

ReactomeiR-CEL-1234176 Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha
R-CEL-674695 RNA Polymerase II Pre-transcription Events
R-CEL-6796648 TP53 Regulates Transcription of DNA Repair Genes
R-CEL-8951664 Neddylation
R-CEL-983168 Antigen processing: Ubiquitination & Proteasome degradation

Gene expression databases

BgeeiWBGene00077680 Expressed in 2 organ(s), highest expression level in multi-cellular organism

Family and domain databases

InterProiView protein in InterPro
IPR039948 ELC1
IPR001232 SKP1-like
IPR011333 SKP1/BTB/POZ_sf
IPR016073 Skp1_comp_POZ
PANTHERiPTHR20648 PTHR20648, 1 hit
PfamiView protein in Pfam
PF03931 Skp1_POZ, 1 hit
SMARTiView protein in SMART
SM00512 Skp1, 1 hit
SUPFAMiSSF54695 SSF54695, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB1Q256_CAEEL
AccessioniPrimary (citable) accession number: B1Q256
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: November 7, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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