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Protein
Submitted name:

LOC100145519 protein

Gene

ythdf3

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100145519 proteinImported
Submitted name:
YTH N6-methyladenosine RNA-binding protein 3Imported
Gene namesi
Name:ythdf3Imported
Synonyms:LOC100145519Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-5752937 ythdf3

Expressioni

Gene expression databases

BgeeiENSXETG00000021659

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000046817

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini403 – 537YTHInterPro annotationAdd BLAST135

Phylogenomic databases

eggNOGiKOG1901 Eukaryota
ENOG410YABQ LUCA
GeneTreeiENSGT00390000017549
HOGENOMiHOG000232058
HOVERGENiHBG060315
KOiK20102
OMAiPYMPSYY
OrthoDBiEOG091G0D17
TreeFamiTF323736

Family and domain databases

InterProiView protein in InterPro
IPR007275 YTH_domain
PfamiView protein in Pfam
PF04146 YTH, 1 hit
PROSITEiView protein in PROSITE
PS50882 YTH, 1 hit

Sequencei

Sequence statusi: Complete.

B1H2Z7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSATSVDQRP KGQGNKVAVQ NGSMHQKDAV NDDDFEPYLN SQTNQSNSYP
60 70 80 90 100
PMSDPYMPSY YAPSIGFPYS LGEAAWSTAG DPPMPYLYGQ MSNGEHHYIP
110 120 130 140 150
DGVFSQPGAL GNTPPFLSQH GFNFFPGNAD FSTWGTSGSQ GQSTQSSAYS
160 170 180 190 200
SSYGYPPSSL GRAIADGQAG FGSDALSKVP GINSIEQGMT GLKIGGDMTA
210 220 230 240 250
AVTKTVGSAL SSAGMTSIAA NSVPPVSSSA PKPTSWAAIA RKPAKPQPKL
260 270 280 290 300
KPKNNVGIGS SAVPPPPIKH NINIGTWDDK GAIVKTPPIQ SVLPPQPVIQ
310 320 330 340 350
QPQPLTQPLP MVQNQLPQQQ LQQQGPQQPP HQIQQQLQNR WVAPRNRGAG
360 370 380 390 400
FNQNNVSGNE NFSLGVVPVS SSPSGVEVHP VLEKLKAINN YNPKDFDWSL
410 420 430 440 450
KNGRVFIIKS YSEDDIHRSI KYTIWCSTEH GNKRLDAAYR SLNGKGPLYL
460 470 480 490 500
LFSVNGSGHF CGVAEMKSVV DYNAYAGVWS QDKWKGKFDV KWVFVKDVPN
510 520 530 540 550
NQLRHIRLEN NDNKPVTNSR DTQEVPLEKA KQVLKIIATF KHTTSIFDDF
560 570
AHYEKRQEEE EAMRRERNRN KQ
Length:572
Mass (Da):62,579
Last modified:April 29, 2008 - v1
Checksum:iADAEC908F76EA148
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01053907 Genomic DNA No translation available.
AAMC01053908 Genomic DNA No translation available.
BC161192 mRNA Translation: AAI61192.1
RefSeqiNP_001120433.1, NM_001126961.1
XP_012819755.1, XM_012964301.2
XP_012819756.1, XM_012964302.2
UniGeneiStr.52162

Genome annotation databases

EnsembliENSXETT00000046817; ENSXETP00000046817; ENSXETG00000021659
GeneIDi100145519
KEGGixtr:100145519

Similar proteinsi

Entry informationi

Entry nameiB1H2Z7_XENTR
AccessioniPrimary (citable) accession number: B1H2Z7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: February 28, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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