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Protein
Submitted name:

TBC1 domain family, member 17

Gene

Tbc1d17

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-RNO-8854214 TBC/RABGAPs

Names & Taxonomyi

Protein namesi
Submitted name:
TBC1 domain family, member 17Imported
Submitted name:
TBC1 domain family, member 17 (Predicted)Imported
Gene namesi
Name:Tbc1d17Imported
Synonyms:Tbc1d17_predictedImported
ORF Names:rCG_54149Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1309686 Tbc1d17

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000020191

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000027436

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini311 – 521Rab-GAP TBCInterPro annotationAdd BLAST211

Phylogenomic databases

eggNOGiKOG2197 Eukaryota
COG5210 LUCA
GeneTreeiENSGT00550000074386
HOGENOMiHOG000012710
HOVERGENiHBG057668
KOiK19945
OMAiHDVLMTY
OrthoDBiEOG091G04IX
TreeFamiTF314296

Family and domain databases

InterProiView protein in InterPro
IPR021935 DUF3548
IPR000195 Rab-GTPase-TBC_dom
IPR035969 Rab-GTPase_TBC_sf
PfamiView protein in Pfam
PF12068 DUF3548, 1 hit
PF00566 RabGAP-TBC, 1 hit
SMARTiView protein in SMART
SM00164 TBC, 1 hit
SUPFAMiSSF47923 SSF47923, 2 hits
PROSITEiView protein in PROSITE
PS50086 TBC_RABGAP, 1 hit

Sequencei

Sequence statusi: Complete.

B1H264-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGSSYRVVF EKGGVYLHTS ARKHQDPDSL IAGVLRVVEK DNDVLLHWAP
60 70 80 90 100
VEEAGDPTQI FFSKKDPSGG EPSTSEEEPT FDPGYEPDWA VISTVRPRPH
110 120 130 140 150
LAEPRRGAEP SSPRSSWAFS VSLGELKSIR RSKPGLSWAY LVLVTQAGGS
160 170 180 190 200
LPALHFHRGG TRALLRVLSR YLLLASSPQD SRLYLVFPQD PSALSDSFHH
210 220 230 240 250
LQLFDQDSSN VVSRFLQDPY STTFSSFSRV TNFFRGALQP HPEGASSPDL
260 270 280 290 300
PPLPDDEPEP GFEVISCVEL GQRPTVERAP PVTEEEWNRH VGPEGRLQNV
310 320 330 340 350
PELKSRIFSG GLSPGLRREA WKFLLGYLSW ESSAEEHKAH VRKKTDEYFR
360 370 380 390 400
MKLQWKSVSA EQERRNSLLH GYRSLIERDV SRTDRTNKFY EGPENPGLGL
410 420 430 440 450
LNDILLTYCM YHFDLGYVQG MSDLLSPILF VVQNEVDAFW CFCGFMELVH
460 470 480 490 500
GNFEESQETM KRQLGQLLLL LRVLDQPLCD FLDSQDSGSL CFCFRWLLIW
510 520 530 540 550
FKREFPFPDV LRLWEVLWTG LPGPNLHLLV ACAILDMERD TLMLSGFGSN
560 570 580 590 600
EILKHINELT MKLSVEDVLT RAEALYRQLT ACPELPHNVQ EILGLAQPEE
610 620 630 640
PSSPSPPVSP MPLSPTRAPM PPPPPEEVAP QPDSSLEILP EDEDGA
Length:646
Mass (Da):72,795
Last modified:April 29, 2008 - v1
Checksum:iFC0E44FA1D3C0952
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094894 Genomic DNA No translation available.
BC160880 mRNA Translation: AAI60880.1
CH473979 Genomic DNA Translation: EDM07455.1
RefSeqiNP_001099728.1, NM_001106258.2
UniGeneiRn.203954

Genome annotation databases

EnsembliENSRNOT00000027436; ENSRNOP00000027436; ENSRNOG00000020191
GeneIDi292886
KEGGirno:292886
UCSCiRGD:1309686 rat

Similar proteinsi

Entry informationi

Entry nameiB1H264_RAT
AccessioniPrimary (citable) accession number: B1H264
Entry historyiIntegrated into UniProtKB/TrEMBL: April 29, 2008
Last sequence update: April 29, 2008
Last modified: July 18, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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