UniProtKB - B1AUX2 (B1AUX2_MOUSE)
Protein
Submitted name:
Host cell factor 1
Gene
Hcfc1
Organism
Mus musculus (Mouse)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Host cell factor 1Imported |
Gene namesi | Name:Hcfc1Imported |
Organismi | Mus musculus (Mouse)Imported |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:105942, Hcfc1 |
Subcellular locationi
Nucleus
- Nucleus ARBA annotation
Nucleus
- MLL1 complex Source: InterPro
- Set1C/COMPASS complex Source: InterPro
Expressioni
Gene expression databases
Bgeei | ENSMUSG00000031386, Expressed in undifferentiated genital tubercle and 306 other tissues |
ExpressionAtlasi | B1AUX2, baseline and differential |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 366 – 457 | Fibronectin type-IIIInterPro annotationAdd BLAST | 92 | |
Domaini | 1853 – 1943 | Fibronectin type-IIIInterPro annotationAdd BLAST | 91 | |
Domaini | 1945 – 2061 | Fibronectin type-IIIInterPro annotationAdd BLAST | 117 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 407 – 434 | DisorderedSequence analysisAdd BLAST | 28 | |
Regioni | 1219 – 1242 | DisorderedSequence analysisAdd BLAST | 24 | |
Regioni | 1302 – 1375 | DisorderedSequence analysisAdd BLAST | 74 | |
Regioni | 1444 – 1475 | DisorderedSequence analysisAdd BLAST | 32 | |
Regioni | 1495 – 1523 | DisorderedSequence analysisAdd BLAST | 29 | |
Regioni | 2049 – 2090 | DisorderedSequence analysisAdd BLAST | 42 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 1738 – 1768 | Sequence analysisAdd BLAST | 31 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 414 – 432 | Pro-richSequence analysisAdd BLAST | 19 | |
Compositional biasi | 1225 – 1242 | PolarSequence analysisAdd BLAST | 18 | |
Compositional biasi | 1302 – 1355 | PolarSequence analysisAdd BLAST | 54 | |
Compositional biasi | 2052 – 2070 | PolarSequence analysisAdd BLAST | 19 |
Keywords - Domaini
Coiled coilSequence analysis, Kelch repeatARBA annotation, RepeatARBA annotationPhylogenomic databases
GeneTreei | ENSGT00940000161383 |
OrthoDBi | 416932at2759 |
Family and domain databases
CDDi | cd00063, FN3, 2 hits |
Gene3Di | 2.120.10.80, 2 hits 2.60.40.10, 2 hits |
InterProi | View protein in InterPro IPR003961, FN3_dom IPR036116, FN3_sf IPR037854, HCF1 IPR043536, HCF1/2 IPR013783, Ig-like_fold IPR015915, Kelch-typ_b-propeller IPR006652, Kelch_1 |
PANTHERi | PTHR46003, PTHR46003, 3 hits PTHR46003:SF3, PTHR46003:SF3, 3 hits |
Pfami | View protein in Pfam PF01344, Kelch_1, 1 hit |
SMARTi | View protein in SMART SM00060, FN3, 2 hits |
SUPFAMi | SSF117281, SSF117281, 1 hit SSF49265, SSF49265, 1 hit |
PROSITEi | View protein in PROSITE PS50853, FN3, 3 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All
B1AUX2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MASAVSPANL PAVLLQPRWK RVVGWSGPVP RPRHGHRAVA IKELIVVFGG
60 70 80 90 100
GNEGIVDELH VYNTATNQWF IPAVRGDIPP GCAAYGFVCD GTRLLVFGGM
110 120 130 140 150
VEYGKYSNDL YELQASRWEW KRLKAKTPKN GPPPCPRLGH SFSLVGNKCY
160 170 180 190 200
LFGGLANDSE DPKNNIPRYL NDLYILELRP GSGVVAWDIP ITYGVLPPPR
210 220 230 240 250
ESHTAVVYTE KDNKKSKLVI YGGMSGCRLG DLWTLDIETL TWNKPSLSGV
260 270 280 290 300
APLPRSLHSA TTIGNKMYVF GGWVPLVMDD VKVATHEKEW KCTNTLACLN
310 320 330 340 350
LDTMAWETIL MDTLEDNIPR ARAGHCAVAI NTRLYIWSGR DGYRKAWNNQ
360 370 380 390 400
VCCKDLWYLE TEKPPPPARV QLVRANTNSL EVSWGAVATA DSYLLQLQKY
410 420 430 440 450
DIPATAATAT SPTPNPVPSV PANPPKSPAP AAAAPAVQPL TQVGITLVPQ
460 470 480 490 500
AATAPPSTTT IQVLPTVPGS SISVPTAART QGVPAVLKVT GPQATTGTPL
510 520 530 540 550
VTMRPASQAG KAPVTVTSLP ASVRMVVPTQ SAQGTVIGSN PQMSGMAALA
560 570 580 590 600
AAAAATQKIP PSSAPTVLSV PAGTTIVKTV AVTPGTTTLP ATVKVASSPV
610 620 630 640 650
MVSNPATRML KTAAAQVGTS VSSAANTSTR PIITVHKSGT VTVAQQAQVV
660 670 680 690 700
TTVVGGVTKT ITLVKSPISV PGGSALISNL GKVMSVVQTK PVQTSAVTGQ
710 720 730 740 750
ASTGPVTQII QTKGPLPAGT ILKLVTSADG KPTTIITTTQ ASGAGTKPTI
760 770 780 790 800
LGISSVSPST TKPGTTTIIK TIPMSAIITQ AGATGVTSSP GIKSPITIIT
810 820 830 840 850
TKVMTSGTGA PAKIITAVPK IATGHGQQGV TQVVLKGAPG QPGTILRTVP
860 870 880 890 900
MGGVRLVTPV TVSAVKPAVT TLVVKGTTGV TTLGTVTGTV STSLAGAGAH
910 920 930 940 950
STSASLATPI TTLGTIATLS SQVINPTAIT VSAAQTTLTA AGGLTTPTIT
960 970 980 990 1000
MQPVSQPTQV TLITAPSGVE AQPVHDLPVS ILASPTTEQP TATVTIADSG
1010 1020 1030 1040 1050
QGDVQPGTVT LVCSNPPCET HETGTTNTAT TTVVANLGGH PQPTQVQFVC
1060 1070 1080 1090 1100
DRQETAASLV TSAVGQQNGN VVRVCSNPPC ETHETGTTNT ATTATSNMAG
1110 1120 1130 1140 1150
QHGCSNPPCE THETGTTSTA TTAMSSMGTG QQRDTRRTTN TPTVVRITVA
1160 1170 1180 1190 1200
PGALERVQGT VKPQCQTQQT NMTTTTMTVQ ATGAPCSAGP LLRPSVALES
1210 1220 1230 1240 1250
GSHSPAFVQL ALPSVRVGLS GPSSKDMPTG RQPETYHTYT TNTPTTTRSI
1260 1270 1280 1290 1300
MVAGELGAAR VVPTSTYESL QASSPSSTMT MTALEALLCP SATVTQVCSN
1310 1320 1330 1340 1350
PPCETHETGT TNTATTSNAG SAQRVCSNPP CETHETGTTH TATTATSNGG
1360 1370 1380 1390 1400
AGQPEGGQQP ASGHPCETHQ TTSTGTTMSV SVGTLIPDAT SSHGTLESGL
1410 1420 1430 1440 1450
EVVAVPTVTS QAGSTLLASF PTQRVCSNPP CETHETGTTH TATTVTSNMS
1460 1470 1480 1490 1500
SNQDPPPAAS DQGEVASTQG DSTNITSASA ITTSVSSTLP RAVTTVTQST
1510 1520 1530 1540 1550
PVPGPSVPNI SSLTETTPGA LNSEVPIPAT ITVTIANTET SDMPFSAVDI
1560 1570 1580 1590 1600
LQPPEELQVS PGPRQQLPPR QLLQSASTPL MGESTEVLSA SQTPELQAAV
1610 1620 1630 1640 1650
DLSSTGDPSS GQEPTTSAVV ATVVVQPPPP TQSEVDQLSL PQELMAEAQA
1660 1670 1680 1690 1700
GTTTLMVTGL TPEELAVTAA AEAAAQAAAT EEAQALAIQA VLQAAQQAVM
1710 1720 1730 1740 1750
AGTGEPMDTS EAAAAVTQAE LGHLSAEGQE GQATTIPIVL TQQELAALVQ
1760 1770 1780 1790 1800
QQQQLQEAQA QAQQQHHLPT EALAPADSLN DPSIESNCLN ELASAVPSTV
1810 1820 1830 1840 1850
ALLPSTATES LAPSNTFVAP QPVVASPAKM QAAATLTEVA NGIESLGVKP
1860 1870 1880 1890 1900
DLPPPPSKAP VKKENQWFDV GVIKGTSVMV THYFLPPDDA VQSDDDSGTV
1910 1920 1930 1940 1950
PDYNQLKKQE LQPGTAYKFR VAGINACGRG PFSEISAFKT CLPGFPGAPC
1960 1970 1980 1990 2000
AIKISKSPDG AHLTWEPPSV TSGKIIEYSV YLAIQSSQAS GEPKSSTPAQ
2010 2020 2030 2040 2050
LAFMRVYCGP SPSCLVQSSS LSNAHIDYTT KPAIIFRIAA RNEKGYGPAT
2060 2070 2080 2090
QVRWLQETSK DSSGTKPASK RPMSSPEMKS APKKSKADGQ
Computationally mapped potential isoform sequencesi
There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketQ61191 | HCFC1_MOUSE | Host cell factor 1 | Hcfc1 | 2,045 | Annotation score: | ||
F6SJS2 | F6SJS2_MOUSE | Host cell factor 1 | Hcfc1 | 612 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL672002 Genomic DNA No translation available. |
RefSeqi | XP_006527898.1, XM_006527835.1 |
Genome annotation databases
Ensembli | ENSMUST00000114372; ENSMUSP00000110012; ENSMUSG00000031386 |
GeneIDi | 15161 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AL672002 Genomic DNA No translation available. |
RefSeqi | XP_006527898.1, XM_006527835.1 |
3D structure databases
SMRi | B1AUX2 |
ModBasei | Search... |
Proteomic databases
jPOSTi | B1AUX2 |
MaxQBi | B1AUX2 |
PeptideAtlasi | B1AUX2 |
PRIDEi | B1AUX2 |
Protocols and materials databases
Antibodypediai | 7165, 235 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000114372; ENSMUSP00000110012; ENSMUSG00000031386 |
GeneIDi | 15161 |
Organism-specific databases
CTDi | 3054 |
MGIi | MGI:105942, Hcfc1 |
Phylogenomic databases
GeneTreei | ENSGT00940000161383 |
OrthoDBi | 416932at2759 |
Miscellaneous databases
BioGRID-ORCSi | 15161, 10 hits in 18 CRISPR screens |
ChiTaRSi | Hcfc1, mouse |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000031386, Expressed in undifferentiated genital tubercle and 306 other tissues |
ExpressionAtlasi | B1AUX2, baseline and differential |
Family and domain databases
CDDi | cd00063, FN3, 2 hits |
Gene3Di | 2.120.10.80, 2 hits 2.60.40.10, 2 hits |
InterProi | View protein in InterPro IPR003961, FN3_dom IPR036116, FN3_sf IPR037854, HCF1 IPR043536, HCF1/2 IPR013783, Ig-like_fold IPR015915, Kelch-typ_b-propeller IPR006652, Kelch_1 |
PANTHERi | PTHR46003, PTHR46003, 3 hits PTHR46003:SF3, PTHR46003:SF3, 3 hits |
Pfami | View protein in Pfam PF01344, Kelch_1, 1 hit |
SMARTi | View protein in SMART SM00060, FN3, 2 hits |
SUPFAMi | SSF117281, SSF117281, 1 hit SSF49265, SSF49265, 1 hit |
PROSITEi | View protein in PROSITE PS50853, FN3, 3 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | B1AUX2_MOUSE | |
Accessioni | B1AUX2Primary (citable) accession number: B1AUX2 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 8, 2008 |
Last sequence update: | April 8, 2008 | |
Last modified: | August 12, 2020 | |
This is version 102 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |