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Protein
Submitted name:

Endo-(1,4)-beta-xylanase

Gene

xynD

Organism
Paenibacillus polymyxa (Bacillus polymyxa)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processCarbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiCBM36 Carbohydrate-Binding Module Family 36
CBM6 Carbohydrate-Binding Module Family 6
GH43 Glycoside Hydrolase Family 43

Names & Taxonomyi

Protein namesi
Submitted name:
Endo-(1,4)-beta-xylanaseImported
Gene namesi
Name:xynDImported
OrganismiPaenibacillus polymyxa (Bacillus polymyxa)Imported
Taxonomic identifieri1406 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500276110427 – 635Sequence analysisAdd BLAST609

Structurei

3D structure databases

ProteinModelPortaliB1A0K7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini379 – 508CBM6InterPro annotationAdd BLAST130
Domaini517 – 634CBM6InterPro annotationAdd BLAST118

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.115.10.20, 1 hit
2.60.120.260, 2 hits
InterProiView protein in InterPro
IPR006584 Cellulose-bd_IV
IPR005084 CMB_fam6
IPR008979 Galactose-bd-like_sf
IPR006710 Glyco_hydro_43
IPR023296 Glyco_hydro_beta-prop_sf
PfamiView protein in Pfam
PF03422 CBM_6, 2 hits
PF04616 Glyco_hydro_43, 1 hit
SMARTiView protein in SMART
SM00606 CBD_IV, 1 hit
SUPFAMiSSF49785 SSF49785, 2 hits
SSF75005 SSF75005, 1 hit
PROSITEiView protein in PROSITE
PS51175 CBM6, 2 hits

Sequencei

Sequence statusi: Complete.

B1A0K7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIRKCLVLFL SFALLLSVFP MLNVDAANRP LAKLPGNSNP LMDHKLGADP
60 70 80 90 100
YSLVYDGRVY IYMSSDTYVY NKDGSIKEND FSRLDRIQVI PSTDMVNWTD
110 120 130 140 150
HGTIPVAGAN NKNGGRGIAK WASNSWAPAV AHKKINGRDK FFLYFANGGA
160 170 180 190 200
GIGVLTADTP IGPWTDPLGK ALVTHSTPGM AGVTWLFDPA VLVDNDGTGY
210 220 230 240 250
LYSGGGIPNE PDPASIANPK TARVIKLGAD MTSVIGSATT IDAPYLFEDS
260 270 280 290 300
GIHKYNGKYY YSYCINFAGT HPPQYPAGEI GYMVSDNPMG PFTYKGHFLK
310 320 330 340 350
NPYTFFGVGG NNHHAVFNFK NEWYVVYHAQ TVSKAQIGDG KGYRSPHINK
360 370 380 390 400
LVHKEDGSIS EVQGNMTGIA QLSNMNPYTR VEAETIAWQA GIATEPTQAS
410 420 430 440 450
GGPIGNLNVT NIHNGDWIAV GKANFGSTGA KTFKANVATN VGGNIEVRLD
460 470 480 490 500
SETGPLVGSL KVPSTGGMQT WREVETTINN ATGVHNVYLV FTGSSNGNLL
510 520 530 540 550
NLDAWQFTPN TGENTVTKVE AENMNIGGTH AGKISAPFDG VALYANADYT
560 570 580 590 600
SYSQYFANPT HNISVRGASS NAGTAKVDLV IGGTTVGSFN FTGKTPTVKT
610 620 630
LSNITHAIGD QEVKLTLTSD DGTWDAYVDF IEFSL
Length:635
Mass (Da):68,103
Last modified:April 8, 2008 - v1
Checksum:i95FBF9ED606303EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU410619 Genomic DNA Translation: ABZ80847.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU410619 Genomic DNA Translation: ABZ80847.1

3D structure databases

ProteinModelPortaliB1A0K7
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM36 Carbohydrate-Binding Module Family 36
CBM6 Carbohydrate-Binding Module Family 6
GH43 Glycoside Hydrolase Family 43

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.115.10.20, 1 hit
2.60.120.260, 2 hits
InterProiView protein in InterPro
IPR006584 Cellulose-bd_IV
IPR005084 CMB_fam6
IPR008979 Galactose-bd-like_sf
IPR006710 Glyco_hydro_43
IPR023296 Glyco_hydro_beta-prop_sf
PfamiView protein in Pfam
PF03422 CBM_6, 2 hits
PF04616 Glyco_hydro_43, 1 hit
SMARTiView protein in SMART
SM00606 CBD_IV, 1 hit
SUPFAMiSSF49785 SSF49785, 2 hits
SSF75005 SSF75005, 1 hit
PROSITEiView protein in PROSITE
PS51175 CBM6, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiB1A0K7_PAEPO
AccessioniPrimary (citable) accession number: B1A0K7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: November 22, 2017
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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