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UniProtKB - B0VBH4 (B0VBH4_ACIBY)

Entry version 81 (02 Dec 2020)
Sequence version 1 (08 Apr 2008)
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Protein

Catalase

Gene

katE

Organism
Acinetobacter baumannii (strain AYE)
Status
Unreviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide.ARBA annotation
Serves to protect cells from the toxic effects of hydrogen peroxide.UniRule annotation

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

hemeUniRule annotationARBA annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei91HemeUniRule annotation1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei94UniRule annotation1
Binding sitei131HemeUniRule annotation1
Active sitei167UniRule annotation1
Binding sitei180HemeUniRule annotation1
Binding sitei377HemeUniRule annotation1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi381Iron (heme axial ligand)UniRule annotation1
Binding sitei388HemeUniRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionOxidoreductase, Peroxidase
Biological processHydrogen peroxideUniRule annotationARBA annotation
LigandHemeUniRule annotationARBA annotation, Iron, Metal-binding

Protein family/group databases

PeroxiBase, a peroxidase database

More...PeroxiBasei		6281, AbauKat01

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
CatalaseUniRule annotationARBA annotation (EC:1.11.1.6UniRule annotationARBA annotation)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:katEImported
Ordered Locus Names:ABAYE2270Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiAcinetobacter baumannii (strain AYE)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri509173 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Moraxellaceae › Acinetobacter › Acinetobacter calcoaceticus/baumannii complex ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002446 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini47 – 435CatalaseInterPro annotationAdd BLAST389

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 44DisorderedSequence analysisAdd BLAST44

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 32PolarSequence analysisAdd BLAST32

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the catalase family.UniRule annotation

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_010645_3_0_6

Identification of Orthologs from Complete Genome Data

More...OMAi		VMWQMSD

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.20.1370.20, 1 hit
2.40.180.10, 1 hit
3.40.50.880, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR018028, Catalase
IPR024712, Catalase_clade2
IPR043156, Catalase_clade2_helical
IPR011614, Catalase_core
IPR037060, Catalase_core_sf
IPR002226, Catalase_haem_BS
IPR010582, Catalase_immune_responsive
IPR041399, Catalase_large_C
IPR020835, Catalase_sf
IPR029062, Class_I_gatase-like

The PANTHER Classification System

More...PANTHERi		PTHR42821, PTHR42821, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00199, Catalase, 1 hit
PF06628, Catalase-rel, 1 hit
PF18011, Catalase_C, 1 hit

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF038927, Catalase_clade2, 1 hit

Protein Motif fingerprint database; a protein domain database

More...PRINTSi		PR00067, CATALASE

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM01060, Catalase, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF52317, SSF52317, 1 hit
SSF56634, SSF56634, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00437, CATALASE_1, 1 hit
PS51402, CATALASE_3, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B0VBH4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDMNDNTKST NKTSEMAGAD AANKANTTQK TEQLDTVRDD ATNEALTTNQ 
        60         70         80         90        100
GVKIADNQNS LRAGIRGSTL LEDFILREKI THFDHERIPE RIVHARGVGA 
       110        120        130        140        150
HGYFQAYEGN ERLTKAGFLT DPTIQTPIFV RFSTVQGPRG SADTVRDIRG 
       160        170        180        190        200
FAIKFYTQEG NFDLVGNNAP VFFVQDGIKF PDFVHAVKPE PDTEIPTGAT 
       210        220        230        240        250
AHDTFWDFVS LVPESAHAVI WAMSDRAIPR NLRSIQGFGV HTFRLINAEG 
       260        270        280        290        300
KSHFVKFHWT PKQGLSALVW DEAQKLAGKD PDFHRRDLYE AIEQGFYPEW 
       310        320        330        340        350
ELGVQIVEEE DEMNFDFDLL DPTKIIPEEL VPVTPIGRFV LNRNVDNYFA 
       360        370        380        390        400
ETEQVAFCPG HVVPGIDFTD DPLLQARLFS YTDTQLSRLG GPNFHQIPIN 
       410        420        430        440        450
KPVCPFHNNQ RDGIHQHTIH KGQAAYQPNS IDGNWPAETP PAASNGGFES 
       460        470        480        490        500
YPEKISGHKL RQRSETFSDY FSQPRLYYKS LAPHEQKHVV DAYTFELSKV 
       510        520        530        540        550
QRKHIRERQV QQILANIDLD LARQVGANLG IEVPDLTLNY KKTAVEKSAK 
       560        570        580        590        600
LSFLAFPPED IQGRKVAVLI HNMVKSDALE AIKNWAIKEG VILHLLAPSL 
       610        620        630        640        650
APVKDHKDNV IVADGMQMSE PSIAYDAVII PDGDNLNTVM QDGVARHYLL 
       660        670        680        690        700
EAYKHLKPIV FLGNKSDLLE PLGLVADEGT LIEDEFQHVA EKFKNLIKAH 
       710 
RVWSREQIAA HVPA
Length:714
Mass (Da):80,193
Last modified:April 8, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iCA6899684EEB8071
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
CU459141 Genomic DNA Translation: CAM87129.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		CAM87129; CAM87129; ABAYE2270

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		aby:ABAYE2270

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU459141 Genomic DNA Translation: CAM87129.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein family/group databases

PeroxiBasei6281, AbauKat01

Genome annotation databases

EnsemblBacteriaiCAM87129; CAM87129; ABAYE2270
KEGGiaby:ABAYE2270

Phylogenomic databases

HOGENOMiCLU_010645_3_0_6
OMAiVMWQMSD

Family and domain databases

Gene3Di1.20.1370.20, 1 hit
2.40.180.10, 1 hit
3.40.50.880, 1 hit
InterProiView protein in InterPro
IPR018028, Catalase
IPR024712, Catalase_clade2
IPR043156, Catalase_clade2_helical
IPR011614, Catalase_core
IPR037060, Catalase_core_sf
IPR002226, Catalase_haem_BS
IPR010582, Catalase_immune_responsive
IPR041399, Catalase_large_C
IPR020835, Catalase_sf
IPR029062, Class_I_gatase-like
PANTHERiPTHR42821, PTHR42821, 1 hit
PfamiView protein in Pfam
PF00199, Catalase, 1 hit
PF06628, Catalase-rel, 1 hit
PF18011, Catalase_C, 1 hit
PIRSFiPIRSF038927, Catalase_clade2, 1 hit
PRINTSiPR00067, CATALASE
SMARTiView protein in SMART
SM01060, Catalase, 1 hit
SUPFAMiSSF52317, SSF52317, 1 hit
SSF56634, SSF56634, 1 hit
PROSITEiView protein in PROSITE
PS00437, CATALASE_1, 1 hit
PS51402, CATALASE_3, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB0VBH4_ACIBY
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B0VBH4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 8, 2008
Last sequence update: April 8, 2008
Last modified: December 2, 2020
This is version 81 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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