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Protein

Beta-1,4 N-acetylgalactosaminyltransferase

Gene

b4galnt1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferaseUniRule annotation, Transferase

Protein family/group databases

CAZyiGT12 Glycosyltransferase Family 12

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-1,4 N-acetylgalactosaminyltransferaseUniRule annotation
Gene namesi
Name:b4galnt1Imported
Synonyms:LOC100145208Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-960512 b4galnt1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Golgi apparatusUniRule annotation, MembraneUniRule annotation

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_500275045822 – 526Beta-1,4 N-acetylgalactosaminyltransferaseSequence analysisAdd BLAST505

Structurei

3D structure databases

ProteinModelPortaliB0JZH1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini276 – 397Glyco_trans_2-likeInterPro annotationAdd BLAST122

Sequence similaritiesi

Belongs to the glycosyltransferase 2 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IF61 Eukaryota
ENOG4111N56 LUCA
HOGENOMiHOG000220853
HOVERGENiHBG004812
KOiK00725
OrthoDBiEOG091G04CW

Family and domain databases

Gene3Di3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR001173 Glyco_trans_2-like
IPR011143 GM2_synthase
IPR029044 Nucleotide-diphossugar_trans
PfamiView protein in Pfam
PF00535 Glycos_transf_2, 1 hit
PIRSFiPIRSF000474 GM2_GD2_synthase, 1 hit
SUPFAMiSSF53448 SSF53448, 1 hit

Sequencei

Sequence statusi: Complete.

B0JZH1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRLTRKLCAA LVVIVPLSLL CFHIFTKPSS VVNVWNREAP KDLLDPSVFQ
60 70 80 90 100
PSEKLSHIPF KWKEDVLQLL PKNSCKCEAE ATLNVPFRQE LFGKPYAVEF
110 120 130 140 150
ASSIDESQLD ETKKRREQEY KKYNIRYHNP TDRLIIAKAN SPLQYPTQGV
160 170 180 190 200
EVHPLKTIII PGLSLQDFLK KVYKVTLSAT MGTFNTAAEV EGVTIKGAGE
210 220 230 240 250
RRITLSSPNL DNLNRQLQFI SYTNTIFNPN TADIVKFQTD EHSATFNIKI
260 270 280 290 300
RHPRVPKLYD SGSSNSKYNI SSLVTIATKT FLRYDKLQNL IDSIRKYYPT
310 320 330 340 350
VTIIIADDSE KPQKVEGPFI EQYIMPYGKG WFAGRNLAIS QVTTKYFLWV
360 370 380 390 400
DDDFIFSPRT KIEKLVDILE KTTLDLVGGA VREITGYYTT YRQMISVFPG
410 420 430 440 450
GKEGDCLMTR QGYHHAIEGF PNCVVTDGVV NFFLARTEKA LQVGFDPRLS
460 470 480 490 500
RIGHLEFFVD GLGILHIGSC DDVIVDHASK IHLPWSKTET DKEYAKFRYP
510 520
KSSDNSQNVN HILFYFKNRF KCMTGN
Length:526
Mass (Da):60,004
Last modified:March 18, 2008 - v1
Checksum:i81BA508B01304DAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC159175 mRNA Translation: AAI59176.1
RefSeqiNP_001120168.1, NM_001126696.1
XP_012811920.1, XM_012956466.2
XP_012811922.1, XM_012956468.2
UniGeneiStr.39741

Genome annotation databases

GeneIDi100145208
KEGGixtr:100145208

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC159175 mRNA Translation: AAI59176.1
RefSeqiNP_001120168.1, NM_001126696.1
XP_012811920.1, XM_012956466.2
XP_012811922.1, XM_012956468.2
UniGeneiStr.39741

3D structure databases

ProteinModelPortaliB0JZH1
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGT12 Glycosyltransferase Family 12

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100145208
KEGGixtr:100145208

Organism-specific databases

CTDi2583
XenbaseiXB-GENE-960512 b4galnt1

Phylogenomic databases

eggNOGiENOG410IF61 Eukaryota
ENOG4111N56 LUCA
HOGENOMiHOG000220853
HOVERGENiHBG004812
KOiK00725
OrthoDBiEOG091G04CW

Family and domain databases

Gene3Di3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR001173 Glyco_trans_2-like
IPR011143 GM2_synthase
IPR029044 Nucleotide-diphossugar_trans
PfamiView protein in Pfam
PF00535 Glycos_transf_2, 1 hit
PIRSFiPIRSF000474 GM2_GD2_synthase, 1 hit
SUPFAMiSSF53448 SSF53448, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiB0JZH1_XENTR
AccessioniPrimary (citable) accession number: B0JZH1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 18, 2008
Last sequence update: March 18, 2008
Last modified: February 28, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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