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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Microcystis aeruginosa (strain NIES-843)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rplMUniRule annotation
Synonyms:rpl13UniRule annotation
Ordered Locus Names:MAE_52510
OrganismiMicrocystis aeruginosa (strain NIES-843)
Taxonomic identifieri449447 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesMicrocystaceaeMicrocystis
Proteomesi
  • UP000001510 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000870931 – 15150S ribosomal protein L13Add BLAST151

Proteomic databases

PaxDbiB0JY35
PRIDEiB0JY35

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi449447.MAE_52510

Structurei

3D structure databases

ProteinModelPortaliB0JY35
SMRiB0JY35
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UM5 Bacteria
COG0102 LUCA
HOGENOMiHOG000225286
KOiK02871
OMAiVLMGKHK
OrthoDBiPOG091H013T

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR023563 Ribosomal_L13_CS
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit
PROSITEiView protein in PROSITE
PS00783 RIBOSOMAL_L13, 1 hit

Sequencei

Sequence statusi: Complete.

B0JY35-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKTPLPNLE TLEQKWYVID AADQRLGRLA TEIAMILRGK NKATFTPHLD
60 70 80 90 100
TGDFVIVINA EKVTVTGKKR QQKVYRRDSG RPGGMKVESF DKLQKRIPER
110 120 130 140 150
IIEHAVKGML PKNSLGRKLF TKLKVYAGAE HPHQAQQPEV LAINTIPAGG

N
Length:151
Mass (Da):16,923
Last modified:March 18, 2008 - v1
Checksum:i73BEF3FF8FCC5DBF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009552 Genomic DNA Translation: BAG05073.1
RefSeqiWP_002735375.1, NC_010296.1

Genome annotation databases

EnsemblBacteriaiBAG05073; BAG05073; MAE_52510
GeneIDi5866088
KEGGimar:MAE_52510

Similar proteinsi

Entry informationi

Entry nameiRL13_MICAN
AccessioniPrimary (citable) accession number: B0JY35
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: March 18, 2008
Last modified: October 25, 2017
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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