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UniProtKB - B0G0Y5 (MYBAA_DICDI)

Entry version 78 (25 May 2022)
Sequence version 1 (18 Mar 2008)
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Protein

Myb-like protein AA

Gene

mybAA

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position and type of each DNA-binding domain present within the protein.<p><a href='/help/dna_bind' target='_top'>More...</a></p>DNA bindingi780 – 802H-T-H motifPROSITE-ProRule annotationAdd BLAST23
DNA bindingi831 – 854H-T-H motifPROSITE-ProRule annotationAdd BLAST24

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Myb-like protein AA
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:mybAA
ORF Names:DDB_G0268368
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDictyostelium discoideum (Slime mold)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri44689 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Amoebozoa › Evosea › Eumycetozoa › Dictyostelia › Dictyosteliales › Dictyosteliaceae › Dictyostelium
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002195 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Dictyostelium discoideum online informatics resource

More...dictyBasei		DDB_G0268368, mybAA

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003293991 – 971Myb-like protein AAAdd BLAST971

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		B0G0Y5

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		44689.DDB0238728

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

AlphaFold Protein Structure Database

More...AlphaFoldDBi		B0G0Y5

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		B0G0Y5

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini752 – 803HTH myb-type 1PROSITE-ProRule annotationAdd BLAST52
Domaini804 – 858HTH myb-type 2PROSITE-ProRule annotationAdd BLAST55

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 54DisorderedSequence analysisAdd BLAST54
Regioni151 – 220DisorderedSequence analysisAdd BLAST70
Regioni288 – 309DisorderedSequence analysisAdd BLAST22
Regioni329 – 383DisorderedSequence analysisAdd BLAST55
Regioni440 – 487DisorderedSequence analysisAdd BLAST48
Regioni509 – 765DisorderedSequence analysisAdd BLAST257
Regioni874 – 898DisorderedSequence analysisAdd BLAST25
Regioni911 – 958DisorderedSequence analysisAdd BLAST48

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi509 – 553Polar residuesSequence analysisAdd BLAST45
Compositional biasi562 – 681Polar residuesSequence analysisAdd BLAST120
Compositional biasi688 – 716Acidic residuesSequence analysisAdd BLAST29
Compositional biasi717 – 734Polar residuesSequence analysisAdd BLAST18
Compositional biasi748 – 765Basic and acidic residuesSequence analysisAdd BLAST18

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG0048, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_305541_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		B0G0Y5

Identification of Orthologs from Complete Genome Data

More...OMAi		NYCAINT

Family and domain databases

Conserved Domains Database

More...CDDi		cd00167, SANT, 2 hits

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR009057, Homeobox-like_sf
IPR017930, Myb_dom
IPR001005, SANT/Myb

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00717, SANT, 2 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF46689, SSF46689, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51294, HTH_MYB, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B0G0Y5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MELTTEAPFI NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN TPNNTSYSNY 
        60         70         80         90        100
PQSGYVYQNY PLNNNNGGNN NNTIYYNQPQ QYDPNYQTSV TSNSYPQYSY 
       110        120        130        140        150
FASPNIISPI PSPCLGSTPS PIPSPTIYQY SNNSNNYCAI NTPPLTSVPS 
       160        170        180        190        200
PILNCNNKKR PEFNNNNNNH NHNNNNNNNN NNNNYNYNNS NNNQQQQKQQ 
       210        220        230        240        250
QQQQQQQQQP QQPQQQSQQQ QQQQQQQQQQ QQQQFKQTNI NTTPKNLSPV 
       260        270        280        290        300
LQSVNSSASS TPQIQSYFQQ PQYQQQYQQQ YQQQYQQYQQ PQQLSSANTT 
       310        320        330        340        350
PQTNERPNYS SIIQPNQLFS QMVPSFINGA INNNNNNNNN NNNNNNNNNN 
       360        370        380        390        400
NNNNNNNNNN NNNNTTTNNN NNNNNNNNYN NITYFQPYTP FSIVDNSSMI 
       410        420        430        440        450
VPDKQPQQQQ PQQQPQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQQQNYN 
       460        470        480        490        500
DDSNKNNNNN NNNNNNNNNN NNNNNNNNNE NINSSNNNNM YNICPAAAYQ 
       510        520        530        540        550
NIQFIKEQSN SSLSSSQPIP PFNLYNEQPQ QQPQQPQPTQ SQPILSSSST 
       560        570        580        590        600
SVFDINHHHH HQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ PQPNLSSSSY 
       610        620        630        640        650
ADNNNSFQSS SGNVWESQSS PIQSSVQISS PPQSNQSSIA PAPAVNLSAS 
       660        670        680        690        700
ASSVATTTKQ SNVKKQKQQQ QQQQQQQQTK RQELSDSEDD TDNGDDIDED 
       710        720        730        740        750
DEDDDEDEDD MEDEDTSSSS SSSSSSSSLS KKSPAVKKSG LKKSGRSKSS 
       760        770        780        790        800
SNESKAKGHW TKEEDEKLRS LVDLHGTKRW KYIASLLCLR NGRQCRERWS 
       810        820        830        840        850
NQLDPSIKRD AWTLEEDRII LDAHSKYGNK WAEISKLLPG RTNCAIKNHW 
       860        870        880        890        900
NSTMKRKLSK KQYDFSSLPP ISSSIVSDNS SSLSTPTDSI SSSPSTSPIT 
       910        920        930        940        950
LSSNVVVNDF DSQQQQQQQQ TYQQPPPQSQ DSGNNQFNFN NNNNNNNNNN 
       960        970 
NNNNNSVESI KLYTNVNISY I
Length:971
Mass (Da):110,871
Last modified:March 18, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i092A89BE814905A3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AAFI02000003 Genomic DNA Translation: EDR41123.1

NCBI Reference Sequences

More...RefSeqi		XP_001732948.1, XM_001732896.1

Genome annotation databases

Ensembl protists genome annotation project

More...EnsemblProtistsi		EDR41123; EDR41123; DDB_G0268368

Database of genes from NCBI RefSeq genomes

More...GeneIDi		8616180

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		ddi:DDB_G0268368

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000003 Genomic DNA Translation: EDR41123.1
RefSeqiXP_001732948.1, XM_001732896.1

3D structure databases

AlphaFoldDBiB0G0Y5
SMRiB0G0Y5
ModBaseiSearch...

Protein-protein interaction databases

STRINGi44689.DDB0238728

Proteomic databases

PaxDbiB0G0Y5

Genome annotation databases

EnsemblProtistsiEDR41123; EDR41123; DDB_G0268368
GeneIDi8616180
KEGGiddi:DDB_G0268368

Organism-specific databases

dictyBaseiDDB_G0268368, mybAA

Phylogenomic databases

eggNOGiKOG0048, Eukaryota
HOGENOMiCLU_305541_0_0_1
InParanoidiB0G0Y5
OMAiNYCAINT

Miscellaneous databases

Protein Ontology

More...PROi		PR:B0G0Y5

Family and domain databases

CDDicd00167, SANT, 2 hits
InterProiView protein in InterPro
IPR009057, Homeobox-like_sf
IPR017930, Myb_dom
IPR001005, SANT/Myb
SMARTiView protein in SMART
SM00717, SANT, 2 hits
SUPFAMiSSF46689, SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51294, HTH_MYB, 2 hits

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiMYBAA_DICDI
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B0G0Y5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: March 18, 2008
Last modified: May 25, 2022
This is version 78 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
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