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Entry version 42 (31 Jul 2019)
Sequence version 2 (22 Jul 2008)
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Protein
Submitted name:

Starch synthase IIIb

Gene
N/A
Organism
Triticum aestivum (Wheat)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
CBM53 Carbohydrate-Binding Module Family 53
GT5 Glycosyltransferase Family 5

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Starch synthase IIIbImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiTriticum aestivum (Wheat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4565 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeTriticinaeTriticum

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
B0FLF0 baseline and differential

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini388 – 473CBM_25InterPro annotationAdd BLAST86
Domaini563 – 654CBM_25InterPro annotationAdd BLAST92
Domaini725 – 814CBM_25InterPro annotationAdd BLAST90

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni52 – 219DisorderedSequence analysisAdd BLAST168
Regioni307 – 349DisorderedSequence analysisAdd BLAST43
Regioni499 – 518DisorderedSequence analysisAdd BLAST20

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili664 – 694Sequence analysisAdd BLAST31

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi146 – 191PolarSequence analysisAdd BLAST46

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

HAMAP database of protein families

More...
HAMAPi
MF_00484 Glycogen_synth, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR005085 CBM25
IPR011835 GS/SS
IPR013534 Starch_synth_cat_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF16760 CBM53, 3 hits
PF08323 Glyco_transf_5, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01066 CBM_25, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B0FLF0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEMALRAQSP LCSRSRPVLL VRPAVPGLAQ SIVKCSRFTR SRLVRCMVAS
60 70 80 90 100
SYPKRNPRRS SAPKPKGTAS REYAPRPSAE SWTSTKKTEH SSADEDGDLG
110 120 130 140 150
ASNGTLSSDT AEQTSTAEEE YEVEFPGNVS SSVEPKGVNE EEVDQKQPPA
160 170 180 190 200
LTSTSMDAES VNEATEHTST ANESSEVDFS GNVSSSVVLE VVDESETEEE
210 220 230 240 250
ADQKQSSASS TSMDVESIDR ELEGYRVRIS ALVGASTQGQ DQSIIGVHEQ
260 270 280 290 300
DKSVITSDEQ DISAVDVPEQ SQSVVAVTRE DTTDQTTSEQ DITEAVVEEI
310 320 330 340 350
ASKNLVARKH SSSEDGVGAR KHANEEPLVA GDGLRVTEDE EQHEPEMQEQ
360 370 380 390 400
VKMDVDPQAL KRRLEELADK NYSIGNKCFV FPELVEADSV IDLYLNRSMS
410 420 430 440 450
ALANEPDILI KGAFNGWRWN HFTEKLHRSE LTGDWWCCKL YLPKQAYRLD
460 470 480 490 500
FVFFNGDTVY ENNSYNDFVL HIEGDGDEHS FEDFLLEEKQ RELERLAAEE
510 520 530 540 550
AERERQAEEE RRKEEERAAM EADRAQAKAE VETTRNKLQH VLGLASRYVD
560 570 580 590 600
NLWYIQPSTY KGGDRVRLYY NRSSRPLKHK NEIWLHGGYN NWTDGPSIVE
610 620 630 640 650
RLVKSEEQDG DWWYANVTLP ESALVYDCVL ADGSPGNASK YDKHGKQDFH
660 670 680 690 700
AGRSKSISDD LFWVEEERRI FERLQRERTE KEDAGRRKAE ITARMKAEMK
710 720 730 740 750
EKTMREFLLS QKHIVYTEPL EVRAGTTVDV LYNPSNTVLN GSPEVWFRCS
760 770 780 790 800
FNRWTHPSGP LPPQKMVNEV NGSHLQATVR VPLDAYMMDF VFSESEEGGI
810 820 830 840 850
YDNRDGMDYH VPVSDSTAKE PPMHIVHIAV EMAPIAKVGG LGDVVTSLSR
860 870 880 890 900
AIQDSGHKVE VIFLKYDCLN LSNVKDLHCR QSSTWGGTEI KVWFGKVEGI
910 920 930 940 950
SVYFLEPQNG MFWVGCVYGK NDESRFGFFC HSALEFLLQS GSSPDIIHCH
960 970 980 990 1000
DWSSAPVAWL YKQQYVHNGL PNGRVVFTIH NLEFGVHHIG KAMAHCDKAT
1010 1020 1030 1040 1050
TVSYTYSKEV SGHGSIAPHY FKFHGIRNGI DSDIWDPYND NFIPVHYTSE
1060 1070 1080 1090 1100
NVVEGKSSAK RALQEKLGLH QTDSPLVGII SRLTAQKGIH LIRHAIYRTL
1110 1120 1130 1140 1150
ERNGQVVLLG SAPDHRIQGD FSNLAAKLHG EFDGRVKLCL TYDEPLSHLI
1160 1170 1180 1190 1200
YAGADFILVP SIFEPCGLTQ LTAMRYGSIP IVRTTGGLYD TIFDVDDDKD
1210 1220 1230 1240 1250
RAREQGLEPN GFSFEGADSN GVDYALDRAI TTWYDARDWH HSLCKRVMEQ
1260 1270
DWSWNRPALD YMELYHPTRK N
Length:1,271
Mass (Da):143,223
Last modified:July 22, 2008 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i9F9FC43B0883C7B0
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
EU333946 mRNA Translation: ABY56823.2

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU333946 mRNA Translation: ABY56823.2

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein family/group databases

CAZyiCBM53 Carbohydrate-Binding Module Family 53
GT5 Glycosyltransferase Family 5

Gene expression databases

ExpressionAtlasiB0FLF0 baseline and differential

Family and domain databases

HAMAPiMF_00484 Glycogen_synth, 1 hit
InterProiView protein in InterPro
IPR005085 CBM25
IPR011835 GS/SS
IPR013534 Starch_synth_cat_dom
PfamiView protein in Pfam
PF16760 CBM53, 3 hits
PF08323 Glyco_transf_5, 1 hit
SMARTiView protein in SMART
SM01066 CBM_25, 3 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB0FLF0_WHEAT
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B0FLF0
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: July 22, 2008
Last modified: July 31, 2019
This is version 42 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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