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UniProtKB - B0CLZ7 (B0CLZ7_DANRE)

Entry version 63 (16 Jan 2019)
Sequence version 1 (26 Feb 2008)
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Protein
Submitted name:

Ceacam1

Gene

ceacam1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Ceacam1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ceacam1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7955 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Organism-specific databases

Zebrafish Information Network genome database

More...ZFINi		ZDB-GENE-010724-14 ceacam1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 18Sequence analysisAdd BLAST18
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_500274688119 – 1025Sequence analysisAdd BLAST1007

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		B0CLZ7

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini118 – 209Ig-likeInterPro annotationAdd BLAST92
Domaini212 – 291Ig-likeInterPro annotationAdd BLAST80
Domaini299 – 385Ig-likeInterPro annotationAdd BLAST87
Domaini390 – 467Ig-likeInterPro annotationAdd BLAST78
Domaini473 – 564Ig-likeInterPro annotationAdd BLAST92
Domaini567 – 647Ig-likeInterPro annotationAdd BLAST81
Domaini651 – 741Ig-likeInterPro annotationAdd BLAST91
Domaini744 – 824Ig-likeInterPro annotationAdd BLAST81
Domaini844 – 910Ig-likeInterPro annotationAdd BLAST67
Domaini921 – 996Ig-likeInterPro annotationAdd BLAST76

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410IFE1 Eukaryota
ENOG410YR1P LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000205866

The HOVERGEN Database of Homologous Vertebrate Genes

More...HOVERGENi		HBG100670

KEGG Orthology (KO)

More...KOi		K06499

Database of Orthologous Groups

More...OrthoDBi		998214at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		B0CLZ7

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.60.40.10, 11 hits

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR013106 Ig_V-set

Pfam protein domain database

More...Pfami		View protein in Pfam
PF07679 I-set, 1 hit
PF13895 Ig_2, 3 hits

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00409 IG, 10 hits
SM00408 IGc2, 9 hits
SM00406 IGv, 3 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF48726 SSF48726, 10 hits

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50835 IG_LIKE, 10 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

B0CLZ7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGYKVLAFFV LFCAPGLCQV NVVPSNNPVA VGSNVTLDVN SSMPITVGLW 
        60         70         80         90        100
LFGPSTLFMW YMGDIIPGNS LQPGVYFNSS TYQLTLSAVT LESSGVYVLD 
       110        120        130        140        150
VYKPNRIRSE ITLEVQEPVG NVNTTVNTTN LVEVNDTVYF TCSVTTSPVW 
       160        170        180        190        200
FSWLNGNSAV KDGGRVQLQN SGQTLIINGV TRYDEGPFKC VVVNNISSQQ 
       210        220        230        240        250
SVEMKLNISY GPGNLTLTAM PEKTVYISGS NFSLSCSADS KPTATFNWML 
       260        270        280        290        300
NGNLLNVNGP VYVFTKATQN QSGVYTCGAQ NAATLRYAAV TKTIRIVDPI 
       310        320        330        340        350
SEVVVNSTSF PVENVPFNLR CNVVGPVDSI QWMKDGVYLY TDNTTTLSSD 
       360        370        380        390        400
NSTLSFKQLA LSDDGLYQCT ASNAVSDMTQ AYNLTVNYGP INTAVSGPFV 
       410        420        430        440        450
AAVGDSVTFS CSSNSRPQSQ YSWYFNGFNV FNGPVYVTAA LLQNQSGLYT 
       460        470        480        490        500
CMAFNSITGK TNNNSMTLTV LVPVSNVVVN ISDGQQPIFS NPFTLTCTAS 
       510        520        530        540        550
GNVDYIQWML NGAVIYPQDG ITFSSDNSTL SFSNLNLSDN GNYQCEASND 
       560        570        580        590        600
ISNMTSTAYD LMVNYGPWNV TLNGPNMARA GSTVTFSCTA DSYPASQFSW 
       610        620        630        640        650
FFNSSWVGNG PVYVTAPLSH NSSGQYTCMA FNAITGSNSS SSAVQLNVID 
       660        670        680        690        700
PVSNVAVNVG NQQPVYNQPF TLTCTASGNV DYIQWVLNGT DFLPHDRITF 
       710        720        730        740        750
SGDNSTLSFN NLTLSDNGHY QCEASNEISN MTSSVYDLVV NYGPWRVTIN 
       760        770        780        790        800
GPSMAETGSS VTFNCTADSL PASQFSWFFN SSWVGNGPVY VTAPLSQNST 
       810        820        830        840        850
GQYTCMAFNA ITGINSSSSA VQLTVIDAIT SVDVTPSPLI PLVSKSLQLT 
       860        870        880        890        900
CNVNGPYINL YWLRNNNNFF PSNRITFSAD NTTVTFSSLQ TTDDGSYQCV 
       910        920        930        940        950
AANAIRHHIS NPYKLMVIYG PQSVQITLHP GIPPVLTCLA VSQPPSVYYW 
       960        970        980        990       1000
ILDNNTVVGD QASITIPITS ILGSNYTCVA KNPLTNLTLP ISQVVSYPNA 
      1010       1020 
ADRFQASHML MGLLVLLFSL LQEWL
Length:1,025
Mass (Da):110,795
Last modified:February 26, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i724DD991446B349D
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
CU638793 mRNA Translation: CAP71942.1

NCBI Reference Sequences

More...RefSeqi		NP_001107266.1, NM_001113794.1

UniGene gene-oriented nucleotide sequence clusters

More...UniGenei		Dr.76456

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		114465

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		dre:114465

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU638793 mRNA Translation: CAP71942.1
RefSeqiNP_001107266.1, NM_001113794.1
UniGeneiDr.76456

3D structure databases

ProteinModelPortaliB0CLZ7
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi114465
KEGGidre:114465

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		634
ZFINiZDB-GENE-010724-14 ceacam1

Phylogenomic databases

eggNOGiENOG410IFE1 Eukaryota
ENOG410YR1P LUCA
HOGENOMiHOG000205866
HOVERGENiHBG100670
KOiK06499
OrthoDBi998214at2759
PhylomeDBiB0CLZ7

Family and domain databases

Gene3Di2.60.40.10, 11 hits
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR013106 Ig_V-set
PfamiView protein in Pfam
PF07679 I-set, 1 hit
PF13895 Ig_2, 3 hits
SMARTiView protein in SMART
SM00409 IG, 10 hits
SM00408 IGc2, 9 hits
SM00406 IGv, 3 hits
SUPFAMiSSF48726 SSF48726, 10 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 10 hits

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiB0CLZ7_DANRE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: B0CLZ7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: January 16, 2019
This is version 63 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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