Rpp25l

Functionⁱ

GO - Molecular functionⁱ

nucleic acid binding Source: InterPro

View the complete GO annotation on QuickGO ...

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Ribonuclease P/MRP subunit p25-likeImported
Gene namesⁱ	Name:Rpp25lImported Synonyms:RGD1306576Imported, RGD1306576_predictedImported ORF Names:rCG_55010Imported
Organismⁱ	Rattus norvegicus (Rat)Imported
Taxonomic identifierⁱ	10116 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
Proteomesⁱ	UP000002494 Componentⁱ: Chromosome 5

Organism-specific databases

Rat genome database More...RGDⁱ	1306576 Rpp25l

RGDⁱ

1306576 Rpp25l

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSRNOG00000059653 Expressed in 9 organ(s), highest expression level in testis

Bgeeⁱ

ENSRNOG00000059653 Expressed in 9 organ(s), highest expression level in testis

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000044167

STRINGⁱ

10116.ENSRNOP00000044167

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	27 – 88	AlbaInterPro annotationAdd BLAST		62

Phylogenomic databases

eggNOGⁱ	KOG2567 Eukaryota ENOG4111WGZ LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00390000002564
HOGENOMⁱ	HOG000231665
HOVERGENⁱ	HBG056729
KEGG Orthology (KO) More...KOⁱ	K14525
OMAⁱ	MKVKDGS
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G0OAF
TreeFamⁱ	TF325688

Family and domain databases

Gene3Dⁱ	3.30.110.20, 1 hit
InterProⁱ	View protein in InterPro IPR036882 Alba-like_dom_sf IPR002775 DNA/RNA-bd_Alba-like
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01918 Alba, 1 hit
SUPFAMⁱ	SSF82704 SSF82704, 1 hit

Sequenceⁱ

Sequence statusⁱ: Complete.

B0BMX6-1 [UniParc]FASTA Add to basket

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        10         20         30         40         50
MEHYRRAGSV ELPASSPMPQ LPPDTLEMRV RDGSKIRNLL GLALARLEGG 
        60         70         80         90        100
STRHVVFSGS GRAAGKAVSC AEIVKRRVPG LHQLTKLRFL QTEDSWVPTS 
       110        120        130        140        150
PDTGLDPLTV RRHVPAVWVL LSRDPLDPSE CGYQPPGAPP GLGSIPSSSC 
       160 
GPRPRRRARD TRS

Length:163

Mass (Da):17,688

Last modified:February 26, 2008 - v1

Checksum:ⁱ08971C9ECDB7E165

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AC110351 Genomic DNA No translation available. BC158601 mRNA Translation: AAI58602.1 CH473962 Genomic DNA Translation: EDL98685.1
NCBI Reference Sequences More...RefSeqⁱ	NP_001100118.1, NM_001106648.2 XP_006238093.1, XM_006238031.2 XP_006238094.1, XM_006238032.2
UniGeneⁱ	Rn.21605

Genome annotation databases

Ensemblⁱ	ENSRNOT00000082496; ENSRNOP00000075391; ENSRNOG00000059653
GeneIDⁱ	298002
KEGGⁱ	rno:298002
UCSC genome browser More...UCSCⁱ	RGD:1306576 rat

Protein	Similar proteins		Species	Score	Length	Source
B0BMX6	Ribonuclease P protein subunit p25-like protein		BOVIN		163	UniRef90_Q2KIR4
Uncharacterized protein		wild yak		163
Uncharacterized protein		NEOLE		197
Uncharacterized protein		LOXAF		163
Uncharacterized protein		RABIT		163
+71

Protein	Similar proteins		Species	Score	Length	Source
B0BMX6	Ribonuclease P protein subunit p25-like protein		HUMAN		163	UniRef50_Q8N5L8
Ribonuclease P protein subunit p25-like protein		MOUSE		163
Ribonuclease P protein subunit p25-like protein		BOVIN		163
Chromosome 9 open reading frame 23		PANTR		163
Alba-like protein C9orf23		MACMU		163
+104

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AC110351 Genomic DNA No translation available. BC158601 mRNA Translation: AAI58602.1 CH473962 Genomic DNA Translation: EDL98685.1
RefSeqⁱ	NP_001100118.1, NM_001106648.2 XP_006238093.1, XM_006238031.2 XP_006238094.1, XM_006238032.2
UniGeneⁱ	Rn.21605

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000044167

STRINGⁱ

10116.ENSRNOP00000044167

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENSRNOT00000082496; ENSRNOP00000075391; ENSRNOG00000059653
GeneIDⁱ	298002
KEGGⁱ	rno:298002
UCSCⁱ	RGD:1306576 rat

Organism-specific databases

CTDⁱ	138716
RGDⁱ	1306576 Rpp25l

Phylogenomic databases

eggNOGⁱ	KOG2567 Eukaryota ENOG4111WGZ LUCA
GeneTreeⁱ	ENSGT00390000002564
HOGENOMⁱ	HOG000231665
HOVERGENⁱ	HBG056729
KOⁱ	K14525
OMAⁱ	MKVKDGS
OrthoDBⁱ	EOG091G0OAF
TreeFamⁱ	TF325688

Gene expression databases

Bgeeⁱ	ENSRNOG00000059653 Expressed in 9 organ(s), highest expression level in testis

Bgeeⁱ

ENSRNOG00000059653 Expressed in 9 organ(s), highest expression level in testis

Family and domain databases

Gene3Dⁱ	3.30.110.20, 1 hit
InterProⁱ	View protein in InterPro IPR036882 Alba-like_dom_sf IPR002775 DNA/RNA-bd_Alba-like
Pfamⁱ	View protein in Pfam PF01918 Alba, 1 hit
SUPFAMⁱ	SSF82704 SSF82704, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	B0BMX6_RAT
Accessionⁱ	B0BMX6Primary (citable) accession number: B0BMX6
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	February 26, 2008
	Last sequence update:	February 26, 2008
	Last modified:	September 12, 2018
	This is version 79 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - B0BMX6 (B0BMX6_RAT)

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Ribonuclease P/MRP subunit p25-like

Select a section on the left to see content.

Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

Organism-specific databases

Expressionⁱ

Gene expression databases

Interactionⁱ

Protein-protein interaction databases

Family & Domainsⁱ

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

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Supporting data

UniProtKB - B0BMX6 (B0BMX6_RAT)

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Ribonuclease P/MRP subunit p25-like

Rpp25l

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<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

UniProt is an ELIXIR core data resource

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Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

Expressionⁱ

Interactionⁱ

Family & Domainsⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ