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Protein
Submitted name:

LOC100144993 protein

Gene

hnrnpa3

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100144993 proteinImported
Gene namesi
Name:hnrnpa3Imported
Synonyms:LOC100144993Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-5878765 hnrnpa3

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 110RRMInterPro annotationAdd BLAST84
Domaini118 – 206RRMInterPro annotationAdd BLAST89

Phylogenomic databases

eggNOGiKOG0118 Eukaryota
COG0724 LUCA
HOGENOMiHOG000234442
HOVERGENiHBG002295
KOiK12741
OrthoDBiEOG091G1CPI

Family and domain databases

CDDicd12763 RRM1_hnRNPA3, 1 hit
cd12582 RRM2_hnRNPA3, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR034513 hnRNPA3_RRM1
IPR034516 hnRNPA3_RRM2
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

B0BM91-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRGAMDDHW PSTDDQGHEP KEPEQLRKLF IGGLSFETTD DSLREHFEQW
60 70 80 90 100
GKLTDCVVMR DPQTKRSRGF GFVTYSCVEE VDAAMSARPH KVDGRVVEPK
110 120 130 140 150
RAVSREDSAR PGAHLTVKKI FVGGIKEDTE EYHLRDYFQS YGKIETIEVM
160 170 180 190 200
EDRQSGKKRG FAFVTFDDHD TVDKIVVQKY HTINGHNCEV KKALSKQEMQ
210 220 230 240 250
TASAQRGRGG GGSNFMGRGG NYGGGGGGGG NFGRGGGFGN RGGYGGGGGG
260 270 280 290 300
GRGGGYGSGG DGGYNGFGGE GGNYGGGPGY GGRGYGGSPG YGNQGGGYGG
310 320 330 340 350
GGSGGGGGGY DGYNEGGNFG GGNYNDFGNY GGQQQSNYGP MKGGSFSGRS
360 370 380
SGGSGSGPYG GGYGSGGGGG GGGGGGSYGG RRF
Length:383
Mass (Da):39,222
Last modified:February 26, 2008 - v1
Checksum:i006B6A8BC1730DA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC158333 mRNA Translation: AAI58334.1
BC161197 mRNA Translation: AAI61197.1
RefSeqiNP_001120028.1, NM_001126556.1
UniGeneiStr.65356

Genome annotation databases

GeneIDi100144993
KEGGixtr:100144993

Similar proteinsi

Entry informationi

Entry nameiB0BM91_XENTR
AccessioniPrimary (citable) accession number: B0BM91
Entry historyiIntegrated into UniProtKB/TrEMBL: February 26, 2008
Last sequence update: February 26, 2008
Last modified: February 28, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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