Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

50S ribosomal protein L13

Gene

rplM

Organism
Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciRSAL288705:G1GAP-1532-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rplMUniRule annotation
Ordered Locus Names:RSal33209_1737
OrganismiRenibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)
Taxonomic identifieri288705 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeRenibacterium
Proteomesi
  • UP000002007 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000871001 – 14750S ribosomal protein L13Add BLAST147

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi288705.RSal33209_1737

Structurei

3D structure databases

ProteinModelPortaliA9WMG0
SMRiA9WMG0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UM5 Bacteria
COG0102 LUCA
HOGENOMiHOG000225286
KOiK02871
OMAiVLMGKHK
OrthoDBiPOG091H013T

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit

Sequencei

Sequence statusi: Complete.

A9WMG0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTYTPKPGD INRQWHVIDA TDVVLGRLAS QTATLLRGKH KPTFAPHMDM
60 70 80 90 100
GDFVIIINAE KVALTGAKLE QKRAYRHSGY PGGLSSVNYA ELLEKNPVRA
110 120 130 140
VEKAIKGMLP KTSLAAQQLS KLKVYRGAEH PHAAQQPKTF EITQVAQ
Length:147
Mass (Da):16,255
Last modified:February 5, 2008 - v1
Checksum:iFB498521E22783CB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000910 Genomic DNA Translation: ABY23473.1
RefSeqiWP_012245145.1, NC_010168.1

Genome annotation databases

EnsemblBacteriaiABY23473; ABY23473; RSal33209_1737
KEGGirsa:RSal33209_1737

Similar proteinsi

Entry informationi

Entry nameiRL13_RENSM
AccessioniPrimary (citable) accession number: A9WMG0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 5, 2008
Last modified: February 28, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health