Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 65 (16 Jan 2019)
Sequence version 1 (05 Feb 2008)
Previous versions | rss
Other tutorials and videosHelp videoFeedback
Protein
Submitted name:

SSS sodium solute transporter superfamily

Gene

Caur_3393

Organism
Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
CAUR324602:G1GAO-3445-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
SSS sodium solute transporter superfamilyImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:Caur_3393Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiChloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri324602 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaChloroflexiChloroflexiaChloroflexalesChloroflexineaeChloroflexaceaeChloroflexus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002008 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei6 – 27HelicalSequence analysisAdd BLAST22
Transmembranei80 – 101HelicalSequence analysisAdd BLAST22
Transmembranei113 – 133HelicalSequence analysisAdd BLAST21
Transmembranei165 – 182HelicalSequence analysisAdd BLAST18
Transmembranei188 – 208HelicalSequence analysisAdd BLAST21
Transmembranei229 – 255HelicalSequence analysisAdd BLAST27
Transmembranei261 – 282HelicalSequence analysisAdd BLAST22
Transmembranei303 – 330HelicalSequence analysisAdd BLAST28
Transmembranei336 – 355HelicalSequence analysisAdd BLAST20
Transmembranei367 – 385HelicalSequence analysisAdd BLAST19
Transmembranei425 – 450HelicalSequence analysisAdd BLAST26
Transmembranei462 – 482HelicalSequence analysisAdd BLAST21
Transmembranei554 – 580HelicalSequence analysisAdd BLAST27
Transmembranei601 – 619HelicalSequence analysisAdd BLAST19
Transmembranei625 – 650HelicalSequence analysisAdd BLAST26
Transmembranei657 – 679HelicalSequence analysisAdd BLAST23
Transmembranei685 – 707HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
324602.Caur_3393

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini72 – 147DUF4212InterPro annotationAdd BLAST76

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4107QS2 Bacteria
COG4147 LUCA
COG4327 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000262336

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
A9WJW2

KEGG Orthology (KO)

More...
KOi
K14393

Identification of Orthologs from Complete Genome Data

More...
OMAi
IANLPGW

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.20.1730.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR038377 Na/Glc_symporter_sf
IPR001734 Na/solute_symporter
IPR019899 Na/solute_symporter_VC_2705
IPR019886 Na_symporter_ssu_prd

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13937 DUF4212, 1 hit
PF00474 SSF, 2 hits

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03648 Na_symport_lg, 1 hit
TIGR03647 Na_symport_sm, 1 hit
TIGR00813 sss, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50283 NA_SOLUT_SYMP_3, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A9WJW2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSAQFWLGLF QLFLVVGGAL AVSLFIIDRL FPPVRQTTGS DTANVRRLRI
60 70 80 90 100
GPASTAVPPP LRWPLAPAWL PQYWQENLRL VGPLLVIWLL SFVLPVVLSA
110 120 130 140 150
PLNQISILTG FPLGYYMSAQ GTLICFVVLI FVYNWRMHIL DRRYGVDPPE
160 170 180 190 200
TPDAQQIRRR YSLRYLGFTI GLLVLLIVFI ILETQFRLPS FLIDWSFLAL
210 220 230 240 250
TIGLYAVIGI RSRADTLDAY YVAERKVPGI LNGLATGSDW MSAASFISMA
260 270 280 290 300
GALYLLGFEG LAYITGWTGG YVLLVLLLAP YLRKFGQYTL VDFIGARYPG
310 320 330 340 350
AGARVIAAVL SIIICFTYVT AQVTGIGIIM SRFLGLNYMV GVIVGLAAVL
360 370 380 390 400
LCSYLGGMKA ITWTQGVQGI ILVFAYLVPV TWLAFKLTGV ALPQVMYGEA
410 420 430 440 450
LSNIDRLEQA QGLASYVAPF NDWSIWNYLA LSLCLMLGTA GMPHILVRFY
460 470 480 490 500
TVPTVRDSRS SVAWALVWIC VLYLTAPAYA AFSRWEILSS VVGRPVAGLP
510 520 530 540 550
EWTSRWASTG LLKIADAPEV GGNGDGILQY HELQIDQDLV VLSTPEIAEL
560 570 580 590 600
PSTVVALVAA GGMAAALSTA DGLLMVIASA TVHDIYHRTL NPRASSRERL
610 620 630 640 650
LLGRLAILVV AILAALTALQ RLAIIVQLVA WAFSFAAATI FPVLVLGIFW
660 670 680 690 700
KRTNSRGAVA GMISGFLVTA SYMAITYILP EWTLFGISSS AAGIFGLPVN
710 720
FLVTWLVSRY GPPPDPEVTA LVDYVRYP
Length:728
Mass (Da):79,514
Last modified:February 5, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iA960BC93D9763153
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP000909 Genomic DNA Translation: ABY36578.1

NCBI Reference Sequences

More...
RefSeqi
WP_012259231.1, NC_010175.1
YP_001636967.1, NC_010175.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
ABY36578; ABY36578; Caur_3393

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
5825195

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
cau:Caur_3393

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|324602.8.peg.3821

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000909 Genomic DNA Translation: ABY36578.1
RefSeqiWP_012259231.1, NC_010175.1
YP_001636967.1, NC_010175.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protein-protein interaction databases

STRINGi324602.Caur_3393

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABY36578; ABY36578; Caur_3393
GeneIDi5825195
KEGGicau:Caur_3393
PATRICifig|324602.8.peg.3821

Phylogenomic databases

eggNOGiENOG4107QS2 Bacteria
COG4147 LUCA
COG4327 LUCA
HOGENOMiHOG000262336
InParanoidiA9WJW2
KOiK14393
OMAiIANLPGW

Enzyme and pathway databases

BioCyciCAUR324602:G1GAO-3445-MONOMER

Family and domain databases

Gene3Di1.20.1730.10, 1 hit
InterProiView protein in InterPro
IPR038377 Na/Glc_symporter_sf
IPR001734 Na/solute_symporter
IPR019899 Na/solute_symporter_VC_2705
IPR019886 Na_symporter_ssu_prd
PfamiView protein in Pfam
PF13937 DUF4212, 1 hit
PF00474 SSF, 2 hits
TIGRFAMsiTIGR03648 Na_symport_lg, 1 hit
TIGR03647 Na_symport_sm, 1 hit
TIGR00813 sss, 1 hit
PROSITEiView protein in PROSITE
PS50283 NA_SOLUT_SYMP_3, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA9WJW2_CHLAA
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A9WJW2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: January 16, 2019
This is version 65 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again