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Entry version 38 (02 Jun 2021)
Sequence version 1 (05 Feb 2008)
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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_97950

Organism
Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Predicted proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:PHYPADRAFT_97950Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPhyscomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3218 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrium

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini397 – 489SANTAInterPro annotationAdd BLAST93

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni37 – 62DisorderedSequence analysisAdd BLAST26
Regioni344 – 389DisorderedSequence analysisAdd BLAST46
Regioni628 – 755DisorderedSequence analysisAdd BLAST128
Regioni852 – 884DisorderedSequence analysisAdd BLAST33
Regioni927 – 951DisorderedSequence analysisAdd BLAST25
Regioni977 – 1024DisorderedSequence analysisAdd BLAST48
Regioni1084 – 1197DisorderedSequence analysisAdd BLAST114

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi355 – 389Polar residuesSequence analysisAdd BLAST35
Compositional biasi727 – 755Polar residuesSequence analysisAdd BLAST29
Compositional biasi852 – 880Basic and acidic residuesSequence analysisAdd BLAST29
Compositional biasi994 – 1024Polar residuesSequence analysisAdd BLAST31
Compositional biasi1090 – 1104Basic and acidic residuesSequence analysisAdd BLAST15
Compositional biasi1108 – 1124Polar residuesSequence analysisAdd BLAST17
Compositional biasi1141 – 1162Basic and acidic residuesSequence analysisAdd BLAST22

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

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HOGENOMi
CLU_265679_0_0_1

InParanoid: Eukaryotic Ortholog Groups

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InParanoidi
A9TVU2

Family and domain databases

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR015216, SANTA

Pfam protein domain database

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Pfami
View protein in Pfam
PF09133, SANTA, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A9TVU2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSCQLQPGAE GSLSESVHFP PTSSFLEHQG YQGDVRMGMA PPLSSFSRAP
60 70 80 90 100
PPRSPFLHDD GRAGSRYVHS GGFDRQGYDY AVHRHSCGDH LELHSGSLLE
110 120 130 140 150
HLLLQENQKA LRIASLVQSQ ASGCLSGCLS CGLGEKRLRY KDSEERMVAD
160 170 180 190 200
QRHCCPRSVG EEPSRSVNLG AEADPVECAD EWFRQPRPRE SVGGVGERSQ
210 220 230 240 250
AKISFFEDEL GRSLCQERRT VFPVSRPVLS HSQASHHIHD HQDHLVGAQE
260 270 280 290 300
SSVPIYGFSD GDGRVRQRWP SQRPAYSGNG VEVDGWQRAT RSVSRVGSVT
310 320 330 340 350
ATEQACKVHS DGAYLCWMRA TSARYDRLSL PDIAAGSLPT VLVGSPHRPV
360 370 380 390 400
GDASRPTQSA RTTSQNLLRM SNSVEPSSRD KPLQEASTQR VVTQGPVSLT
410 420 430 440 450
GWYIMKVQTA DVGRVVETKV AVGGRLVQGG EHVKTSPIVN RLDFHKVVTE
460 470 480 490 500
DGVEVSLEGS MDLETSTANG FSPGIVQCLC NGFPYMWKQL LRVRPVGMSS
510 520 530 540 550
SLAVSESVGG LHPVASKCVS EDESQGVVDP NICKTIPKGI PGGSRDCEGN
560 570 580 590 600
STVGDVGSDA VAAVDEPSVI QRIASDAVGS KRVETEAVVT AGAETSTAVE
610 620 630 640 650
TEPVDPGGVE RCEPPNAFEI EAMILGGGTT VRDEPPNADG KGTVEPEGEG
660 670 680 690 700
IGRANTSNAI DEGCPLDVPS QQACDPCPTN FDPVPVSNPL DTDSLGKEAE
710 720 730 740 750
SGPTVDTTFV TMRRGRKNKK GPPQPVRSSA RLQQRRTKSA ESMPNLFKSS
760 770 780 790 800
GPAQVEQVTV SGEVTRDNSG EQELGEILPD VQRAANGREK ITRTSDIIGE
810 820 830 840 850
VLKDLQEEDM EAANQGGVPG AGFVGIVVDP QPIQVEISVQ VQDSGKNLLK
860 870 880 890 900
DRDDVEVPKL NENDATEDRM EIEENKEMAP AASSDFENEK SEETAQAAPA
910 920 930 940 950
ATFKLVNEEM EEAAPVTPPE LIQRKVQSRV DSRYKPSSEA LPQASEERVS
960 970 980 990 1000
PELNARMTRS LKRRLRLSAI SEPVADVAPV TRSSKRLRRP VPESNSEPSI
1010 1020 1030 1040 1050
SHQVGDPLVQ PVSNPDLSHQ VEGPSMEPIS NPVTPHHGEV NGFHARVRDL
1060 1070 1080 1090 1100
STRRAKAVNC SNCKKPCSSQ EVIKYKNRIA SIGATPEHAV ERTMKTEQEE
1110 1120 1130 1140 1150
YPPLEPQRTE STPGTSSLPK KGETNTSSAK RRSGRPKKTK SANLPAERRT
1160 1170 1180 1190 1200
TRRLKLDDSG EGPSEGHNPV PSKQSSRRTS IMPPPLPSPR VQGGLKGKVP
1210 1220 1230 1240 1250
EAFGLKTSRS GRLLVPALAY WRSQSIEYDK DGGIIAIFDG FQATPSDTGC
1260 1270 1280 1290 1300
FNFTPPQEKH AKKIQEKLCK AAATVKKRKF NVQIILLKLL HVPPVVEFMF
1310
MLKTKCGQGT WILEM
Length:1,315
Mass (Da):142,496
Last modified:February 5, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6F457FA3C03E5D48
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
DS545226 Genomic DNA Translation: EDQ52492.1

NCBI Reference Sequences

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RefSeqi
XP_001782727.1, XM_001782675.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545226 Genomic DNA Translation: EDQ52492.1
RefSeqiXP_001782727.1, XM_001782675.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Phylogenomic databases

HOGENOMiCLU_265679_0_0_1
InParanoidiA9TVU2

Family and domain databases

InterProiView protein in InterPro
IPR015216, SANTA
PfamiView protein in Pfam
PF09133, SANTA, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA9TVU2_PHYPA
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A9TVU2
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: June 2, 2021
This is version 38 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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