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Protein
Submitted name:

SNF2 family DNA-dependent ATPase

Gene

CHR1544

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
SNF2 family DNA-dependent ATPaseImported
Gene namesi
Name:CHR1544Imported
ORF Names:PHYPADRAFT_34Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S317_10V6.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini189 – 277ChromoInterPro annotationAdd BLAST89
Domaini302 – 365ChromoInterPro annotationAdd BLAST64
Domaini428 – 599Helicase ATP-bindingInterPro annotationAdd BLAST172
Domaini735 – 886Helicase C-terminalInterPro annotationAdd BLAST152

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili161 – 181Sequence analysisAdd BLAST21
Coiled coili926 – 946Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0384 Eukaryota
COG0553 LUCA
InParanoidiA9TTS1

Family and domain databases

CDDicd00024 CHROMO, 2 hits
cd00079 HELICc, 1 hit
Gene3Di3.40.50.10810, 1 hit
InterProiView protein in InterPro
IPR016197 Chromo-like_dom_sf
IPR000953 Chromo/chromo_shadow_dom
IPR023780 Chromo_domain
IPR025260 DUF4208
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038718 SNF2-like_sf
IPR000330 SNF2_N
PfamiView protein in Pfam
PF00385 Chromo, 1 hit
PF13907 DUF4208, 1 hit
PF00271 Helicase_C, 1 hit
PF00176 SNF2_N, 1 hit
SMARTiView protein in SMART
SM00298 CHROMO, 2 hits
SM00487 DEXDc, 1 hit
SM01176 DUF4208, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits
SSF54160 SSF54160, 2 hits
PROSITEiView protein in PROSITE
PS50013 CHROMO_2, 2 hits
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

Sequencei

Sequence statusi: Fragment.

A9TTS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DDPQDSDFDP TDGASSRVKD SDAELSEEVS DESLNLSDDS LDLSDDSDNS
60 70 80 90 100
YGKRRASRKR KTTRTSQANR NRTRVLRTQR LRVQGSLCSS DNESSAKDSV
110 120 130 140 150
EEESDEDSSY GRPQRKTVTS SRRKRQETSG SAHALKNDRD LSAKEARTRT
160 170 180 190 200
SSRALPRKSY VEAEDSQASE EERDKKRLKE IEEEEDYGDA IERVLWHQPK
210 220 230 240 250
GIAEAEAEEG RHADPFVLDT DPNAELTWKN QEFYIKWKGQ SYLHCSWMPL
260 270 280 290 300
SELELLSGYK KVVNYMKKID EDRQVRQTLS PEEAELHDVS KEMELDLLKQ
310 320 330 340 350
YLQVERVFAD RNRVDNEEEI TEYLVKWKGL SYCDSTWFKD TDIAFAQSQI
360 370 380 390 400
DECKAREAET TFQGKPVDVQ RRKGKDDTNF HSWEICIIFN ILSLSLICLN
410 420 430 440 450
MRKLEEQPEW LKGGTLRDYQ LEGLNFLMNS WRNDTNVILA DEMGLGKTVQ
460 470 480 490 500
SVSMLGFLQY AQQIPGPFLV VVPLSTITNW AKEFRKWLPD MNVVVYVGNR
510 520 530 540 550
ASREVSQHEF YTGRKTGRTI KFNTLLTTYE VVLKDKAVLS KIKWCYLMVD
560 570 580 590 600
EAHRLKNCEA SLYTTLQEFS TKNKVLVTGT PLQNSVEELW ALLHFLDSDK
610 620 630 640 650
FKSKEHFTEH YKNLSSFDEK ELANLHAELR PHLLRRIIKD VEKSLPPKIE
660 670 680 690 700
RILRVEMSPL QKQYYKWILE RNFNDLNKGV RVNQVSLLNI VVELKKCCNH
710 720 730 740 750
PFLFESADYG YGGDANTNDN NKIQRIVLSS GKLAILDKLL VRLKETKHRV
760 770 780 790 800
LIFSQMVKML DILADYLSLR GFQFQRLDGS TRADLRHQAM EHFNAPGSED
810 820 830 840 850
FCFLLSTRAG GLGINLATAD TVIIFDSDWN PQNDLQAMSR AHRIGQRDVV
860 870 880 890 900
NIYRFVISRS VEEDILERAK KKMASSKLIL MPEFLCVLDH LVIQKLNAQG
910 920 930 940 950
RLEKKEAKKG TGFDKNELAA ILRFGAEELF KDDKNEEDQK SKLENMDIDE
960 970 980 990 1000
ILARAEKVET KSATEVDAEG NELLGAFKVA NFSNTEDDAT FWSRLIPPEA
1010 1020 1030 1040 1050
ARQAEDMSGP RVARTIRNYS EDLGSERNDK RRRGDGKEKL PKRGSRSSKE
1060 1070 1080 1090 1100
YVPPSEIEGA AARTAKWGGG VLTKKEANSF IKAVKKFGDL SRIKLIAKEA
1110 1120 1130 1140 1150
GDPVSETSTS LQSELWDALV NGCKDAVRRA GVDCKAAVLD FFGVPVKSQD
1160 1170 1180 1190 1200
MLGRINELTL LGRRIKRFKD PVAQFRLKSH PRVPSWSKVC DWSQVDDARL
1210 1220 1230 1240 1250
LLGVHYHGLG NWERIRLDER LLLVDKLAPQ GATSADTSLP RSTHLEARVN
1260 1270 1280 1290 1300
ALLRKELEVS GVINGNDEAE RPLGGKGVYK RDWLDDSAKD RSAKLDIGLG
1310 1320 1330 1340 1350
RKGSGGSGSQ KLNARDRAAK RLRAEQDVKE EGEISDTDED NMGRQSKEEK
1360 1370 1380 1390 1400
WHHWCAQMME DQTRTLERLQ RLQTDFSLPK EEVLRRVKTY LQTLGHKIDS
1410 1420 1430 1440
ILAENATAPN PDRMATRLWN YVSTFSNLKG DKLAEIYKKL RLEPQ
Length:1,445
Mass (Da):165,149
Last modified:February 5, 2008 - v1
Checksum:iB98F7C0777A2EA29
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei1445Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545206 Genomic DNA Translation: EDQ53147.1
RefSeqiXP_001782004.1, XM_001781952.1

Similar proteinsi

Entry informationi

Entry nameiA9TTS1_PHYPA
AccessioniPrimary (citable) accession number: A9TTS1
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: July 18, 2018
This is version 64 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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