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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_193706

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_193706Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei842 – 864HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane, NucleusSAAS annotation

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi3218.PP1S203_56V6.1

Structurei

3D structure databases

ProteinModelPortaliA9TCE6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 99Importin N-terminalInterPro annotationAdd BLAST76

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1991 Eukaryota
COG5656 LUCA
InParanoidiA9TCE6

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR013713 Cse1
IPR001494 Importin-beta_N
PfamiView protein in Pfam
PF08506 Cse1, 1 hit
PF03810 IBN_N, 1 hit
SMARTiView protein in SMART
SM00913 IBN_N, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50166 IMPORTIN_B_NT, 1 hit

Sequencei

Sequence statusi: Complete.

A9TCE6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDLPTLATVL QSALSTNPEE RKAGEERLNQ YQHVQGHLAG LLQIIVATHI
60 70 80 90 100
DLSIRQVASI YFKNVIARDW VPREPVVVPK ISDTDKALVR EHLLEAIVQA
110 120 130 140 150
PYIIRVQLGE CLKTCIHADY PEHWPDLLPA IFNNLKSQDQ QRVYGALYAL
160 170 180 190 200
RILTRKYEFK DEEERMPVYH IINTTFPVLL EILNHLLALP NPAIEVADLI
210 220 230 240 250
KLILKIFWSS AYLEIPKLLH DVNTFTAWMS SFHNLLERPV PVEGQPTNPE
260 270 280 290 300
QRKVWGWWKV KKWTLHIMNR LYNRFGDPKM SKPENKAFAL MFQKNFSGKF
310 320 330 340 350
LELYMKLLSV VRENGYLPDR VINLALQYLS TSVSKAVTYQ LLKPQLDVVL
360 370 380 390 400
FEIIFPLMCF NDADDVLWRE DPHEYVRKGY DIIEDMYSPR TAAINFISEL
410 420 430 440 450
VRKRGKENLQ KFLSFIVEVF RRYDEAPADQ KPYRQKDGAL LAVGALNDKL
460 470 480 490 500
KLTEPYKSQL EHMLVNHVYP EFRSPAGHLR AKAAWVAGQY ADITFSDQRH
510 520 530 540 550
FTSALHSVVA ALTDPELPVR VDSVVSLRTF VEACKDLSEI RPILPQLLDE
560 570 580 590 600
FFKLMNEVEN EDLVFTLETI VDKFGEEMAP YALGLCQNLA AAFWKCLESS
610 620 630 640 650
ETDDDEDDSG ALAAVGCLRA IGTILESVSR LPEIYPAIEP TLLPIMQRML
660 670 680 690 700
TTDGQDVFEE VLEIVSYMTY FSPVISVNMW SLWPLMVDAL LEWAIDYFEN
710 720 730 740 750
LLVPLDNYIS RSTEHFLTCT QPDYQTSLFK VISTLMAAEK LEDSDIEPAP
760 770 780 790 800
KLIEAVLQNC RGRVDQWLEP YLRISIERLR KTRKNYLKDL LVNVIANGLY
810 820 830 840 850
YNAPMCLTIL QHLGVTSEIF QSWFQMLYEV KKSGKPLHFV RYYLILLQCL
860 870 880 890
VLWLFGVWLL LLNLGTSNYD FHVRPGSLTI YFGSLGSTTR RFVF
Length:894
Mass (Da):103,094
Last modified:February 5, 2008 - v1
Checksum:i60881B0CB1E3DF36
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545092 Genomic DNA Translation: EDQ58928.1
RefSeqiXP_001776295.1, XM_001776243.1

Genome annotation databases

EnsemblPlantsiPP1S203_56V6.1; PP1S203_56V6.1; PP1S203_56V6
GrameneiPP1S203_56V6.1; PP1S203_56V6.1; PP1S203_56V6

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545092 Genomic DNA Translation: EDQ58928.1
RefSeqiXP_001776295.1, XM_001776243.1

3D structure databases

ProteinModelPortaliA9TCE6
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3218.PP1S203_56V6.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPP1S203_56V6.1; PP1S203_56V6.1; PP1S203_56V6
GrameneiPP1S203_56V6.1; PP1S203_56V6.1; PP1S203_56V6

Phylogenomic databases

eggNOGiKOG1991 Eukaryota
COG5656 LUCA
InParanoidiA9TCE6

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR013713 Cse1
IPR001494 Importin-beta_N
PfamiView protein in Pfam
PF08506 Cse1, 1 hit
PF03810 IBN_N, 1 hit
SMARTiView protein in SMART
SM00913 IBN_N, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50166 IMPORTIN_B_NT, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA9TCE6_PHYPA
AccessioniPrimary (citable) accession number: A9TCE6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: July 18, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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