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Entry version 68 (11 Dec 2019)
Sequence version 1 (05 Feb 2008)
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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_167323

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Predicted proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:PHYPADRAFT_167323Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPhyscomitrella patens subsp. patens (Moss)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3218 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

NucleusSAAS annotation

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3218.PP1S143_55V6.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1231 – 1282SANTInterPro annotationAdd BLAST52
Domaini1469 – 1521SANTInterPro annotationAdd BLAST53
Domaini1943 – 1994SANTInterPro annotationAdd BLAST52

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni257 – 364DisorderedSequence analysisAdd BLAST108
Regioni422 – 509DisorderedSequence analysisAdd BLAST88
Regioni558 – 626DisorderedSequence analysisAdd BLAST69
Regioni856 – 886DisorderedSequence analysisAdd BLAST31
Regioni1130 – 1156DisorderedSequence analysisAdd BLAST27
Regioni1347 – 1454DisorderedSequence analysisAdd BLAST108
Regioni1919 – 1950DisorderedSequence analysisAdd BLAST32
Regioni2315 – 2361DisorderedSequence analysisAdd BLAST47
Regioni2644 – 2668DisorderedSequence analysisAdd BLAST25
Regioni2764 – 2786DisorderedSequence analysisAdd BLAST23
Regioni2847 – 2876DisorderedSequence analysisAdd BLAST30

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili824 – 851Sequence analysisAdd BLAST28
Coiled coili1082 – 1102Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi267 – 281PolarSequence analysisAdd BLAST15
Compositional biasi285 – 309PolyampholyteSequence analysisAdd BLAST25
Compositional biasi473 – 501PolyampholyteSequence analysisAdd BLAST29
Compositional biasi558 – 595PolarSequence analysisAdd BLAST38
Compositional biasi597 – 615PolyampholyteSequence analysisAdd BLAST19
Compositional biasi866 – 880PolyampholyteSequence analysisAdd BLAST15
Compositional biasi1140 – 1154PolyampholyteSequence analysisAdd BLAST15
Compositional biasi1400 – 1454PolarSequence analysisAdd BLAST55
Compositional biasi1933 – 1950PolyampholyteSequence analysisAdd BLAST18
Compositional biasi2315 – 2346PolarSequence analysisAdd BLAST32
Compositional biasi2644 – 2658PolarSequence analysisAdd BLAST15

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1878 Eukaryota
ENOG410YDXP LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
A9SZT2

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00167 SANT, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR009057 Homeobox-like_sf
IPR001005 SANT/Myb
IPR017884 SANT_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00249 Myb_DNA-binding, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00717 SANT, 3 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46689 SSF46689, 3 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51293 SANT, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A9SZT2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRSGLWAFRK RVCDVCYSVG RFRAGGLGAS SSAETGSRSE GGRDAVLVGR
60 70 80 90 100
VSGVTGEARI RVGAERVCVC GARDYDGTEW GMMQGVDRGV LKRADGTGSS
110 120 130 140 150
CSLFVEDSSG IVDSWEERLE EVKVNVFEAG ADVLLTLVQS VTLLALVFPS
160 170 180 190 200
ARYNTSVVGV VLVSRTGHYA HKFFTKSCGI WYCTVCLGHP SISCALAPAV
210 220 230 240 250
LRRLGSEMSD VPRLNYEAVT AMIVRFFGKE RRLRRRPKRT RESGCWFTVH
260 270 280 290 300
EKMYSPGRGD ARATAPPNAR DSSTSMPIDH SSAWQREPYN RDVRLDRGDR
310 320 330 340 350
DRTIGGKREW SSDRASPGAP YQRGFGGLHS VNGNLGPPNK RRLNGRHSGF
360 370 380 390 400
HTENRRYGSA GYRGEPPFGS IVPLDNGLAR KLDRDSFYPG SGCLVTNTGF
410 420 430 440 450
SNGPGIDHRS KELEEKLKLG SFLSSGNGRD GGASGGHDQN GRPFPSQVLT
460 470 480 490 500
EVENTSWERE RSKGLVGNGW ESSQRSEREH RERLLGKAES YSRREGKFSQ
510 520 530 540 550
FEGGKDSSQV DQDLELRKLD RCGSSSWDSF SGDTVCESKL SVHGLDWRRK
560 570 580 590 600
ERSTSDCLSR SASYVASNGG TKESMVRSQG LDVSGRASSP HRSPKSKPPS
610 620 630 640 650
ARVEVSRDDG NHPSPPKRPR LGWGQGLAKY EKKKVVETDE NVVSGSVGSV
660 670 680 690 700
SGGGRSSITS VISGPTTEVV QTQDLQMAED STVSVVSKLA PSPSLTPSVS
710 720 730 740 750
LLPQTLESVS KPCLESPGVT REDLNKSYVK AANGIDLPTL TATSPGSRVE
760 770 780 790 800
DSVTNADLFA ATECSLELSV RQSDSCEPVE RPTALKESSS CRASPAAPCS
810 820 830 840 850
VEQCCGLEVT QEVCSTGDTT WWSKEDILQR VEKLESEIEQ VERELATLEQ
860 870 880 890 900
FRSLKNDAPT PVPETFEDSA DKDTGTELEP GKNGHHVMGQ DAVVLHAGSM
910 920 930 940 950
ECRDDSQPLL ASSPNRICSV SPECISHSVS SLETGAAVGA GPPMCNQAMG
960 970 980 990 1000
SKHRSIENEF LVMEEGQSHE GEKEATSDQT MVESEGEGSL VSSPSAEVYL
1010 1020 1030 1040 1050
PHMTHRERAG VKVRMSKSAI AEKESSDAAM VVGDVEAVAR GLIGENKDQA
1060 1070 1080 1090 1100
RHASEAFLHL LSQGGRGEGK VYSCPVEAPV WKENVERHVR NQEKMLEKIA
1110 1120 1130 1140 1150
ERRQSARFVE QVLTIKFRAL KDAWRQEQFG TSQQQRGTKP VRRWEAEKRG
1160 1170 1180 1190 1200
GTAGCHRSSL RLRPVQAGGG KLEAQSEESM KRVMVEPVVG PLRPALKMPA
1210 1220 1230 1240 1250
MILGERERLA RRFESNNALV EDPVRVESER KSMNPWSAEE RRVFLEKFAV
1260 1270 1280 1290 1300
YNKNFSKIAS HLEYKTTADC VEFYCRNQKS EDFEKIRRRQ QLQKRRDCSR
1310 1320 1330 1340 1350
LGGSFLSTGL QPNSRQREAN IDARSEGWNM QTSGAVSTVC QITVGAKAAR
1360 1370 1380 1390 1400
SSTHHKPLER QRTSSSLDPG SLPAVVEIAK STSGKESRPS GIPPLPSGAA
1410 1420 1430 1440 1450
GSGTTGSCSL SSATAASVKV SRERTSVKSN WNGGSAVARS GTKEQQMSGP
1460 1470 1480 1490 1500
KGARSVNIRR GLTTSAGEEA NAQWTDKERE LFTEAVSLFG KDFESIAAHV
1510 1520 1530 1540 1550
GSTKSEGQCK SFFSKTRKRL RLDQLVEKYQ AALNFRADAA VAESPEFIDV
1560 1570 1580 1590 1600
QMEEVPGAAA EVVLVASLEA NIYPSLGEEK VWNEATESGK VEEVANDVSV
1610 1620 1630 1640 1650
QATEAVEAEM CKDIAAEKTV EEESYEDVVV AKAVEEGLCE GVAIERAGKE
1660 1670 1680 1690 1700
EIFDNAAVHK AVEEVLSEDV GVEKAVEDRS VEAKGVEVEC TPGKGVEHQA
1710 1720 1730 1740 1750
VKDEVVDDET VEDVAEEGVV GVIEVVETVD FVGVSMDLTV ESAVCPPESP
1760 1770 1780 1790 1800
DIVEDVKKAE ADVGAGACSM NECDTGEAED VFAACIKAEP VVVDEEVVSE
1810 1820 1830 1840 1850
PLTVDAGEEL PAGNSSGSSA DCGMQEEGDA VEVAKGAESV VESVKREVDA
1860 1870 1880 1890 1900
GDDKGLGTVV ATSTLAAEEQ LVEASGAVDV KHEAGSPQVA VSTGTESGSC
1910 1920 1930 1940 1950
AIGAEGACHS GKAAYATTSS MHGSQQCREK SGRVGSGEAK PRREPTSWTQ
1960 1970 1980 1990 2000
EEKEVFADII RNYGKDWTRL HECLPTKSLT QIKTYFQNSK AKLGLVNSEG
2010 2020 2030 2040 2050
VSVGGGRGSG SRKRKAEEVD NMSNNVGCVS GGNESKCGSV SGGDVDGGGQ
2060 2070 2080 2090 2100
KVKGGMGDPP SMSVSAGMGT IPVGLEGLAY PFFGQRAEDQ MALHQFMRQL
2110 2120 2130 2140 2150
QLCNPNGLPQ NIPPMLYPLL QQQGLGVFPY PGLQRAGPPN LQQQFAASMS
2160 2170 2180 2190 2200
QKTSQSMGLQ LALQGPGVGQ QSGAVDLHQQ GAHQLQNSQA ARSQQQLLAN
2210 2220 2230 2240 2250
MMQQAAAQQA AAQLQQQQYQ YSKSVVHPQQ QVMVLQPGQV SQRQQQLVSQ
2260 2270 2280 2290 2300
QVGHHPQVQQ VCQAQESSSV HPVGSESLGV NHPDQLTFHL KQLHEQQQQQ
2310 2320 2330 2340 2350
AYIQQPQFQR AVHLVQKQQQ QQHSQHDLAE SNSQGHIHQH HSCHTSPVPS
2360 2370 2380 2390 2400
VAVPKPKGLM ISPQQPTATF SAPLLQQGGS IHRQDQQPQH GVSMTLFSGN
2410 2420 2430 2440 2450
GGSSLSGNVG DVSNYHGELG ELRENCSDEG AAKAREFSRA DLHQMSAAVQ
2460 2470 2480 2490 2500
RVKPLQAAVP PVPSSTPATE SPQSRPVDVK LFGQSLLSQP TCSGALQSAA
2510 2520 2530 2540 2550
RASLPTADKV SLRESAVYTT SSSPVTSMSV PAATGSKAYA KEASFSGVPA
2560 2570 2580 2590 2600
MPDGRQGGWP STGYSVITEA RKNVNGMRPQ VGPVWKSKEG ELELHNIQEG
2610 2620 2630 2640 2650
RMSRGARRAE PEQNVPTITH KLYDHEQSRS DLMHSRSEAH LSVNNFGDSA
2660 2670 2680 2690 2700
NEQGGGFPSS SGEGLGADYE RKSESTVLDS DGCERGSTMC SRGSRALADS
2710 2720 2730 2740 2750
FAMQTIGSLA NGSQISRTVM NALVAFADLQ SRNLQSFSST GSPRLEDHQW
2760 2770 2780 2790 2800
ESLVRQAAHG AAVESLKAHP SVGRGGPSGA PQAHLSGGDL LQQCVRDGGM
2810 2820 2830 2840 2850
YFTQHYPRLA SQPGVSSGAW NAGAGLMNPS DVQRVLVSPA FSSFLPGALS
2860 2870
RAPPAAEEHL GSTKSRDPDN GGGGLR
Length:2,876
Mass (Da):308,909
Last modified:February 5, 2008 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i10A7BD24787023F2
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
DS545032 Genomic DNA Translation: EDQ63326.1

NCBI Reference Sequences

More...
RefSeqi
XP_001771897.1, XM_001771845.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545032 Genomic DNA Translation: EDQ63326.1
RefSeqiXP_001771897.1, XM_001771845.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi3218.PP1S143_55V6.1

Phylogenomic databases

eggNOGiKOG1878 Eukaryota
ENOG410YDXP LUCA
InParanoidiA9SZT2

Family and domain databases

CDDicd00167 SANT, 2 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001005 SANT/Myb
IPR017884 SANT_dom
PfamiView protein in Pfam
PF00249 Myb_DNA-binding, 2 hits
SMARTiView protein in SMART
SM00717 SANT, 3 hits
SUPFAMiSSF46689 SSF46689, 3 hits
PROSITEiView protein in PROSITE
PS51293 SANT, 3 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA9SZT2_PHYPA
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A9SZT2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: December 11, 2019
This is version 68 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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