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Protein
Submitted name:

Predicted protein

Gene

PHYPA_000719

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • mRNA binding Source: GO_Central
  • structural constituent of ribosome Source: GO_Central

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPA_000719Imported, PHYPADRAFT_183175Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
Proteomesi
  • UP000006727 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S63_162V6.1

Structurei

3D structure databases

ProteinModelPortaliA9SBR7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3204 Eukaryota
COG0102 LUCA
InParanoidiA9SBR7
OMAiEVGWHYL

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR023563 Ribosomal_L13_CS
IPR005755 Ribosomal_L13_euk/arc
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PTHR11545:SF3 PTHR11545:SF3, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01077 L13_A_E, 1 hit
PROSITEiView protein in PROSITE
PS00783 RIBOSOMAL_L13, 1 hit

Sequencei

Sequence statusi: Complete.

A9SBR7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVSGSGLCAK VVVVDARHHM LGRLASILAK ELLNGQKIVV VRCEEICLSG
60 70 80 90 100
GLVRQKMKYL RFLRKRMNTK PSKGPIHFRS PARILWRTIR GMIPHKTKRG
110 120 130 140 150
AAALERLKAF EGVPAPYDKM KRMVIPDALK VLRLQPGHKF CLLGRLSEEV
160 170 180 190 200
GWHHYDTIKE LEEKRKAKSK VFYERKKQLI QLRLKAAKSV EEQLAPLQET

LAPITYTS
Length:208
Mass (Da):23,772
Last modified:February 5, 2008 - v1
Checksum:i657D94B4E9E0D9D3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544952 Genomic DNA Translation: EDQ71401.1
ABEU02000001 Genomic DNA Translation: PNR62295.1
RefSeqiXP_001763759.1, XM_001763707.1

Genome annotation databases

EnsemblPlantsiPNR62295; PNR62295; PHYPA_000719
GrameneiPNR62295; PNR62295; PHYPA_000719

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544952 Genomic DNA Translation: EDQ71401.1
ABEU02000001 Genomic DNA Translation: PNR62295.1
RefSeqiXP_001763759.1, XM_001763707.1

3D structure databases

ProteinModelPortaliA9SBR7
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3218.PP1S63_162V6.1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPNR62295; PNR62295; PHYPA_000719
GrameneiPNR62295; PNR62295; PHYPA_000719

Phylogenomic databases

eggNOGiKOG3204 Eukaryota
COG0102 LUCA
InParanoidiA9SBR7
OMAiEVGWHYL

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR023563 Ribosomal_L13_CS
IPR005755 Ribosomal_L13_euk/arc
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PTHR11545:SF3 PTHR11545:SF3, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01077 L13_A_E, 1 hit
PROSITEiView protein in PROSITE
PS00783 RIBOSOMAL_L13, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA9SBR7_PHYPA
AccessioniPrimary (citable) accession number: A9SBR7
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 7, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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